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AT4G22530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G10830.1); Has 1214 Blast hits to 1209 proteins in 451 species: Archae - 2; Bacteria - 749; Metazoa - 75; Fungi - 155; Plants - 166; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
DNASU:828348eggNOG:ENOG4111IQHeggNOG:KOG3010EMBL:AL033545EMBL:AL161557EMBL:AY150518EMBL:CP002687
EnsemblPlants:AT4G22530EnsemblPlants:AT4G22530.1entrez:828348Gene3D:3.40.50.150GeneID:828348GO:GO:0005634GO:GO:0005737
GO:GO:0005829GO:GO:0008168Gramene:AT4G22530.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF781HOGENOM:HOG000028565InterPro:IPR013216
InterPro:IPR029063KEGG:ath:AT4G22530OMA:CKFPESQPfam:PF08241PhylomeDB:Q9SUW6PIR:T05447Proteomes:UP000006548
RefSeq:NP_193984.1SMR:Q9SUW6STRING:3702.AT4G22530.1SUPFAM:SSF53335TAIR:AT4G22530UniGene:At.32526UniProt:Q9SUW6
Coordinates (TAIR10) chr4:-:11859247..11860129
Molecular Weight (calculated) 29107.70 Da
IEP (calculated) 4.99
GRAVY (calculated) -0.13
Length 261 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGVYDSQAD IYLDARPTYP ADWYSKLAAL SHRHNLAWDA GTGNGQAAIG IAEHYERVVA TDVSETMLNL GKPHPKVTYH HTPSSMTEDE MVDLIGGENS
101: VDLITVATAV HWFDLPRFYA IANRLLRKPG GIIAVWSYNT DMVVNPEFDS VMTRFIAETL PYCKFPESQY FLDGYKTLPF PFESVGLGSE GKPMELEMKK
201: TVSFEGFLRM LRSWSAVGAA KEKGVDLLSD NVVKELETAW GGYELVRTIV YKTFMLAGTV P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)