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AT4G22460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 751 Blast hits to 745 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 751; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL033545EMBL:AL161557EMBL:CP002687EnsemblPlants:AT4G22460EnsemblPlants:AT4G22460.1entrez:828341GeneID:828341
Gramene:AT4G22460.1hmmpanther:PTHR31731HOGENOM:HOG000237797InterPro:IPR016140InterPro:IPR027923KEGG:ath:AT4G22460OMA:KETCPID
Pfam:PF14547PhylomeDB:Q9SUX3PIR:T05440Proteomes:UP000006548RefSeq:NP_193977.1SMART:SM00499SMR:Q9SUX3
STRING:3702.AT4G22460.1SUPFAM:SSF47699TAIR:AT4G22460TMHMM:TMhelixUniGene:At.65414UniProt:Q9SUX3
Coordinates (TAIR10) chr4:-:11839160..11839561
Molecular Weight (calculated) 14056.50 Da
IEP (calculated) 8.21
GRAVY (calculated) 0.38
Length 133 amino acids
Sequence (TAIR10)
(BLAST)
001: MALKDSLALL LLFNILFFTL TTATRSTNCP PPPGKHNKQK PSPTPTTGTC PKDALKVGVC VNALNLLNGL TPGTPPVTPC CSLIEGLVDL EAAICLCTAL
101: KASVLGINLT LPINLSLLLN ICNREASRDF QFP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)