AT4G22270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF3537) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a plasma membrane protein involved in the positive regulation of organ size development. Overexpression results in organ size enlargement. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MEMBRANE RELATED BIGGER1 (MRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of cell division, organ growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT4G03820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11773396..11775782 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49796.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.76 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.29 | ||||||||||||||||||||||||||||||||
| Length | 437 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATNGSSEHL LPETTRPSAI INKQQPEFPA SRFTFMSLVL WFDQSNFGTA LLSWSVFFLL VVIVPLISHF LLVCSDCDFH HRRPYDVIVQ LSLSIFAGIS 101: FVSLSIWSRK FGMRRFLFLD KLWDVSDKVR IEYEAEIQRS LKRLMIFVLP SLTLEATYRI WWYISGFNQI PYIINPILSH VVACTLQLSS WLYRNSLFII 201: VCILYKITCH LQTLRLDDFA RCFASEITDV RSALGEHQKI RRNLRIVSHR FRRFILLSLI LVTATQFMAL LTTTRASVAV NIYEVGELAL CSLSLVTGVF 301: ICLRSATKIT HKAQSVTSLA AKWNVCATVD SFDHLDGETP TGSIIESQVS LRGNAIETSD DEEGEGDDDL DNTKIHPIYA NTISYQKRQA LVTYLENNKA 401: GITVYGFLVD RSWLNTIFGI ELALLLWLLN KTIVNIP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)