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AT4G22190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.902
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW0CeggNOG:ENOG410YJ9KEMBL:AY099607EMBL:AY128854EMBL:CP002687EnsemblPlants:AT4G22190EnsemblPlants:AT4G22190.1
entrez:828310GeneID:828310Gramene:AT4G22190.1hmmpanther:PTHR35132hmmpanther:PTHR35132:SF1HOGENOM:HOG000238618KEGG:ath:AT4G22190
OMA:CRTEESSPhylomeDB:Q8L4C5Proteomes:UP000006548RefSeq:NP_567650.2TAIR:AT4G22190UniGene:At.1969UniProt:Q8L4C5
Coordinates (TAIR10) chr4:-:11742102..11743265
Molecular Weight (calculated) 42334.90 Da
IEP (calculated) 10.33
GRAVY (calculated) -0.72
Length 387 amino acids
Sequence (TAIR10)
(BLAST)
001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)