AT4G22130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : STRUBBELIG-receptor family 8 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 157986 Blast hits to 122624 proteins in 4302 species: Archae - 115; Bacteria - 15061; Metazoa - 46349; Fungi - 9189; Plants - 68190; Viruses - 340; Other Eukaryotes - 18742 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11723733..11727331 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76090.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.39 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 703 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIGDRAMFT VLLLFIASIS GFSVVRCVTD PSDVQALQVL YTSLNSPSQL TNWKNGGGDP CGESWKGITC EGSAVVTIDI SDLGVSGTLG YLLSDLKSLR 101: KLDVSGNSIH DTLPYQLPPN LTSLNLARNN LSGNLPYSIS AMGSLSYMNV SGNSLTMSIG DIFADHKSLA TLDLSHNNFS GDLPSSLSTV STLSVLYVQN 201: NQLTGSIDVL SGLPLKTLNV ANNHFNGSIP KELSSIQTLI YDGNSFDNVP ASPQPERPGK KETPSGSKKP KIGSEEKSSD SGKGLSGGVV TGIVFGSLFV 301: AGIIALVLYL CLHKKKRKVR GSTRASQRSL PLSGTPEVQE QRVKSVASVA DLKSSPAEKV TVDRVMKNGS ISRIRSPITA SQYTVSSLQV ATNSFSQENI 401: IGEGSLGRVY RAEFPNGKIM AIKKIDNAAL SLQEEDNFLE AVSNMSRLRH PNIVPLAGYC TEHGQRLLVY EYVGNGNLDD TLHTNDDRSM NLTWNARVKV 501: ALGTAKALEY LHEVCLPSIV HRNFKSANIL LDEELNPHLS DSGLAALTPN TERQVSTQVV GSFGYSAPEF ALSGIYTVKS DVYTFGVVML ELLTGRKPLD 601: SSRTRAEQSL VRWATPQLHD IDALSKMVDP SLNGMYPAKS LSRFADIIAL CIQPEPEFRP PMSEVVQQLV RLVQRASVVK RRSSDDTGFS YRTPEHEHVD 701: ISF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)