suba logo
AT4G22070.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WRKY DNA-binding protein 31
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group II-b
Computational
Description (TAIR10)
WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:13585eggNOG:ENOG410IENHeggNOG:ENOG410YDVMEMBL:AL022140EMBL:AL161556EMBL:AY052648EMBL:CP002687
EnsemblPlants:AT4G22070EnsemblPlants:AT4G22070.1entrez:828296Gene3D:2.20.25.80GeneID:828296Genevisible:Q93WT0GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0043565Gramene:AT4G22070.1hmmpanther:PTHR31429hmmpanther:PTHR31429:SF16HOGENOM:HOG000241202
InParanoid:Q93WT0InterPro:IPR003657KEGG:ath:AT4G22070ncoils:CoilOMA:ESESNAWPaxDb:Q93WT0Pfam:PF03106
Pfam:Q93WT0Pfscan:PS50811PhylomeDB:Q93WT0PRIDE:Q93WT0PRO:PR:Q93WT0PROSITE:PS50811ProteinModelPortal:Q93WT0
Proteomes:UP000006548RefSeq:NP_567644.1SMART:SM00774SMR:Q93WT0STRING:3702.AT4G22070.1SUPFAM:0050605SUPFAM:SSF118290
TAIR:AT4G22070tair10-symbols:ATWRKY31tair10-symbols:WRKY31UniGene:At.26289UniProt:Q93WT0
Coordinates (TAIR10) chr4:-:11691381..11694234
Molecular Weight (calculated) 58544.20 Da
IEP (calculated) 5.94
GRAVY (calculated) -0.72
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MFRFPVSLGG SRDEDRHDQI TPLDDHRVVV DEVDFFSEKR DRVSRENIND DDDEGNKVLI KMEGSRVEEN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM
101: DMEDKRAKIE NAQLQEELKK MKIENQRLRD MLSQATTNFN ALQMQLVAVM RQQEQRNSSQ DHLLAQESKA EGRKRQELQI MVPRQFMDLG PSSGAAEHGA
201: EVSSEERTTV RSGSPPSLLE SSNPRENGKR LLGREESSEE SESNAWGNPN KVPKHNPSSS NSNGNRNGNV IDQSAAEATM RKARVSVRAR SEAAMISDGC
301: QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA TAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS
401: SSMATISASA PFPTITLDLT NSPNGNNPNM TTNNPLMQFA QRPGFNPAVL PQVVGQAMYN NQQQSKFSGL QLPAQPLQIA ATSSVAESVS AASAAIASDP
501: NFAAALAAAI TSIMNGSSHQ NNNTNNNNVA TSNNDSRQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)