AT4G21800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.733 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370). | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
quatre-quart2 (QQT2); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division; LOCATED IN: microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 2058 Blast hits to 2011 proteins in 308 species: Archae - 125; Bacteria - 22; Metazoa - 628; Fungi - 487; Plants - 203; Viruses - 22; Other Eukaryotes - 571 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11573289..11574976 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42553.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.26 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 379 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDPMESSSEQ DIVEESQKLV DSLDKLRVSA ASSSSNFKKK PIIIIVVGMA GSGKTSFLHR LVCHTFDSKS HGYVVNLDPA VMSLPFGANI DIRDTVKYKE 101: VMKQYNLGPN GGILTSLNLF ATKFDEVVSV IEKRADQLDY VLVDTPGQIE IFTWSASGAI ITEAFASTFP TVVTYVVDTP RSSSPITFMS NMLYACSILY 201: KTRLPLVLAF NKTDVADHKF ALEWMEDFEV FQAAIQSDNS YTATLANSLS LSLYEFYRNI RSVGVSAISG AGMDGFFKAI EASAEEYMET YKADLDMRKA 301: DKERLEEERK KHEMEKLRKD MESSQGGTVV LNTGLKDRDA TEKMMLEEDD EDFQVEDEED SDDAIDEDDE DDETKHYYL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)