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AT4G21410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:14760709 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (CRK29); FUNCTIONS IN: kinase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (TAIR:AT4G21400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21410-MONOMERBioGrid:13184EC:2.7.11.-eggNOG:COG0515
eggNOG:ENOG410IJDFEMBL:AL022603EMBL:AL031187EMBL:AL161555
EMBL:AY074844EMBL:CP002687EnsemblPlants:AT4G21410EnsemblPlants:AT4G21410.1
entrez:827893Gene3D:2.60.120.200GeneID:827893Genevisible:Q8S9L6
GO:GO:0004674GO:GO:0005524GO:GO:0005773GO:GO:0005886
GO:GO:0006468GO:GO:0006952GO:GO:0009506GO:GO:0009737
GO:GO:0016021Gramene:AT4G21410.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF122
HOGENOM:HOG000116550InParanoid:Q8S9L6InterPro:IPR000719InterPro:IPR001245
InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT4G21410OMA:YSNRTIYPaxDb:Q8S9L6
Pfam:PF01657Pfam:PF07714Pfam:Q8S9L6Pfscan:PS50011
Pfscan:PS51473PhylomeDB:Q8S9L6PIR:T05149PRIDE:Q8S9L6
PRO:PR:Q8S9L6PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:Q8S9L6Proteomes:UP000006548RefSeq:NP_193872.2
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q8S9L6
STRING:3702.AT4G21410.1SUPFAM:SSF56112TAIR:AT4G21410tair10-symbols:CRK29
TMHMM:TMhelixUniGene:At.43984UniProt:Q8S9L6
Coordinates (TAIR10) chr4:-:11402463..11405025
Molecular Weight (calculated) 75724.10 Da
IEP (calculated) 7.16
GRAVY (calculated) -0.20
Length 679 amino acids
Sequence (TAIR10)
(BLAST)
001: MEHVRVIFFF ACFLTLAPFH AFAQVDSYEF DPDFNCVDRG NFTANSTFAG NLNRLVSSLS SLKSQAYGFY NLSSGDSSGE RAYAIGLCRR EVKRDDCVSC
101: IQTAARNLTK QCPLTKQAVV WYTHCMFRYS NRTIYGRKET NPTKAFIAGE EISANRDDFE RLQRGLLDRL KGIAAAGGPN RKYAQGNGSA SAGYRRFYGT
201: VQCTPDLSEQ DCNDCLVFGF ENIPSCCDAE IGLRWFSPSC NFRFETWRFY EFDADLEPDP PAIQPADSPQ SAARTERTGK GKGGSKVIIA IVIPILLVAL
301: LAICLCLVLK WRKNKSGYKN KVLGKSPLSG SIAEDEFSNT ESLLVHFETL KTATDNFSSE NELGRGGFGS VYKGVFPQGQ EIAVKRLSGN SGQGDNEFKN
401: EILLLAKLQH RNLVRLIGFC IQGEERLLVY EFIKNASLDQ FIFDTEKRQL LDWVVRYKMI GGIARGLLYL HEDSRFRIIH RDLKASNILL DQEMNPKIAD
501: FGLAKLFDSG QTMTHRFTSR IAGTYGYMAP EYAMHGQFSV KTDVFSFGVL VIEIITGKRN NNGGSNGDED AEDLLSWVWR SWREDTILSV IDPSLTAGSR
601: NEILRCIHIG LLCVQESAAT RPTMATVSLM LNSYSFTLPT PLRPAFVLES VVIPSNVSSS TEGLQMSSND VTVSEFSPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)