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AT4G21060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.946
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2332 Blast hits to 2297 proteins in 115 species: Archae - 0; Bacteria - 6; Metazoa - 1696; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZZ1BeggNOG:KOG2287EMBL:CP002687EnsemblPlants:AT4G21060
EnsemblPlants:AT4G21060.1entrez:827853ExpressionAtlas:F4JIK9Gene3D:2.60.120.200
GeneID:827853GO:GO:0005794GO:GO:0010405GO:GO:0012505
GO:GO:0016021GO:GO:0018258GO:GO:0030246GO:GO:0035250
GO:GO:0080147GO:GO:1990714Gramene:AT4G21060.1gramene_plant_reactome:1119341
gramene_plant_reactome:6874277gramene_plant_reactome:6874579hmmpanther:PTHR11214hmmpanther:PTHR11214:SF92
InterPro:IPR001079InterPro:IPR002659InterPro:IPR013320OMA:HRPVIEH
PANTHER:PTHR11214PaxDb:F4JIK9Pfam:PF00337Pfam:PF01762
Pfscan:PS51304PRIDE:F4JIK9PROSITE:PS51304ProteinModelPortal:F4JIK9
Proteomes:UP000006548RefSeq:NP_193838.2SMART:SM00908STRING:3702.AT4G21060.1
SUPFAM:SSF49899TAIR:AT4G21060TMHMM:TMhelixUniGene:At.32667
UniProt:F4JIK9
Coordinates (TAIR10) chr4:+:11240730..11244860
Molecular Weight (calculated) 84302.40 Da
IEP (calculated) 8.55
GRAVY (calculated) -0.33
Length 741 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSRLARFV SEVAPPQFVT VMRRHRAAKQ KLDTIKEEEN KEDSFNGGMV VMMKTSHQHT LLIFRSCRDL AAIVGFRILL FTGFSGFYLV FLAFKFPHFI
101: EMVAMLSGDT GLDGALSDTS LDVSLSGSLR NDMLNRKLED EDHQSGPSTT QKVSPEEKIN GSKQIQPLLF RYGRISGEVM RRRNRTIHMS PFERMADEAW
201: ILGSKAWEDV DKFEVDKINE SASIFEGKVE SCPSQISMNG DDLNKANRIM LLPCGLAAGS SITILGTPQY AHKESVPQRS RLTRSYGMVL VSQFMVELQG
301: LKTGDGEYPP KILHLNPRIK GDWNHRPVIE HNTCYRMQWG VAQRCDGTPS KKDADVLVDG FRRCEKWTQN DIIDMVDSKE SKTTSWFKRF IGREQKPEVT
401: WSFPFAEGKV FVLTLRAGID GFHINVGGRH VSSFPYRPGF TIEDATGLAV TGDVDIHSIH ATSLSTSHPS FSPQKAIEFS SEWKAPPLPG TPFRLFMGVL
501: SATNHFSERM AVRKTWMQHP SIKSSDVVAR FFVALNPRKE VNAMLKKEAE YFGDIVILPF MDRYELVVLK TIAICEFGVQ NVTAPYIMKC DDDTFIRVES
601: ILKQIDGVSP EKSLYMGNLN LRHRPLRTGK WTVTWEEWPE AVYPPYANGP GYIISSNIAK YIVSQNSRHK LRLFKMEDVS MGLWVEQFNA SMQPVEYSHS
701: WKFCQYGCTL NYYTAHYQSP SQMMCLWDNL LKGRPQCCNF R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)