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AT4G20095.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.799
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF626)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF626); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 118 Blast hits to 118 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSP4eggNOG:ENOG41108MTEMBL:CP002687EMBL:DQ446855EnsemblPlants:AT4G20095EnsemblPlants:AT4G20095.1entrez:827755
ExpressionAtlas:Q3E9Y4GeneID:827755Gramene:AT4G20095.1hmmpanther:PTHR31260hmmpanther:PTHR31260:SF28HOGENOM:HOG000064597PhylomeDB:Q3E9Y4
Proteomes:UP000006548RefSeq:NP_680726.2TAIR:AT4G20095UniGene:At.54425UniProt:Q3E9Y4
Coordinates (TAIR10) chr4:-:10872180..10873072
Molecular Weight (calculated) 23554.70 Da
IEP (calculated) 5.34
GRAVY (calculated) -0.72
Length 201 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNGMWKQEA RDLVEEPSQS NEKLEDQRPQ ESSSSIPRHV WANRREEKFD YNKYYIKQRA DIAKYGGPHP NIILFGRVGL HCYNLQNGTN LQFLTVHNFD
101: SWITSILSHF ISLEAMDPVD NSICEFETHV RYAVENKHCL STITTGGRIK PKIPEEEDTY FGWNKDLVDD FFKGGMPEWM PEDALTGRDK LQYYEVRFFM
201: C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)