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AT4G20070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : allantoate amidohydrolase
Curator
Summary (TAIR10)
The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.
Computational
Description (TAIR10)
allantoate amidohydrolase (AAH); CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: ureidoglycolate amidohydrolase (TAIR:AT5G43600.1); Has 3541 Blast hits to 3529 proteins in 962 species: Archae - 54; Bacteria - 2502; Metazoa - 32; Fungi - 158; Plants - 88; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G20070-MONOMERBioCyc:MetaCyc:AT4G20070-MONOMERBRENDA:3.5.3.9EC:3.5.3.9eggNOG:COG0624eggNOG:ENOG410II0MEMBL:AL021637
EMBL:AL161552EMBL:BT025334EMBL:CP002687EnsemblPlants:AT4G20070EnsemblPlants:AT4G20070.1entrez:827752Gene3D:3.30.70.360
GeneID:827752Genevisible:O49434GO:GO:0005783GO:GO:0006145GO:GO:0008237GO:GO:0010136GO:GO:0046872
GO:GO:0047652Gramene:AT4G20070.1gramene_pathway:3.5.3.-gramene_pathway:3.5.3.9gramene_pathway:PWY-5692gramene_pathway:PWY-5698hmmpanther:PTHR32494
hmmpanther:PTHR32494:SF7HOGENOM:HOG000241291InParanoid:O49434InterPro:IPR001261InterPro:IPR002933InterPro:IPR010158InterPro:IPR011650
KEGG:ath:AT4G20070KO:K02083MEROPS:M20.A07OMA:GECNHAGPaxDb:O49434Pfam:O49434Pfam:PF01546
Pfam:PF07687PhylomeDB:O49434PIR:F85227PRIDE:O49434PRO:PR:O49434PROSITE:PS00758ProteinModelPortal:O49434
Proteomes:UP000006548RefSeq:NP_193740.1scanprosite:PS00758SMR:O49434STRING:3702.AT4G20070.1SUPFAM:SSF53187SUPFAM:SSF55031
TAIR:AT4G20070tair10-symbols:AAHtair10-symbols:ATAAHTIGRfam:TIGR01879TIGRFAMs:TIGR01879UniGene:At.32752UniProt:O49434
Coordinates (TAIR10) chr4:+:10861548..10864529
Molecular Weight (calculated) 56527.50 Da
IEP (calculated) 6.10
GRAVY (calculated) -0.04
Length 525 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVPHPSSSS SRSHPFLSHV YHTSFHHHHH HNHPSLVLFW CLVFSLLSPL ALSSSSSSSS SSSDSSSSSS SHISLGIGET EGTKHDLHQA ILRDEAVARL
101: HELGQVSDAA THLERTFMSP ASIRAIPLIR GWMEDAGLST WVDYMGNVHG RVEPKNGSSQ ALLIGSHMDT VIDAGKYDGS LGIISAISAL KVLKIDGRLG
201: ELKRPVEVIA FSDEEGVRFQ STFLGSAALA GIMPVSRLEV TDKSGISVQD ALKENSIDIT DENLMQLKYD PASVWGYVEV HIEQGPVLEW VGYPLGVVKG
301: IAGQTRLKVT VKGSQGHAGT VPMSMRQDPM TGAAELIVLL ESVCKNPKDY LSCNVQCNED TVESLANSLV CTVGEISTWP SASNVIPGQV TFTVDLRTID
401: DVGRKAILHD LSTRMYQICD KRSLLCSIER KHDADAVMSD PQLSLQLKSA AQSALKKMTG EVQDEVPVLM SGAGHDAMAM AHLTKVGMLF VRCRGGISHS
501: PAEHVLDDDV GAAGLAILEF LESQM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)