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AT4G19860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.568
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: lecithin:cholesterol acyltransferase 3 (TAIR:AT3G03310.1); Has 596 Blast hits to 589 proteins in 168 species: Archae - 2; Bacteria - 89; Metazoa - 166; Fungi - 41; Plants - 181; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G19860-MONOMEREC:2.3.1.-eggNOG:ENOG410Y9CFeggNOG:KOG2369EMBL:AF421149EMBL:AL024486EMBL:AL161551
EMBL:BT022028EMBL:CP002687EnsemblPlants:AT4G19860EnsemblPlants:AT4G19860.1entrez:827730ESTHER:arath-LCAT4Gene3D:3.40.50.1820
GeneID:827730Genevisible:Q71N54GO:GO:0004620GO:GO:0005829GO:GO:0008374GO:GO:0009395Gramene:AT4G19860.1
gramene_pathway:3.1.1.32gramene_pathway:LIPASYN-PWYhmmpanther:PTHR11440hmmpanther:PTHR11440:SF3HOGENOM:HOG000005782InParanoid:Q71N54InterPro:IPR003386
InterPro:IPR029058iPTMnet:Q71N54KEGG:ath:AT4G19860OMA:YHDMIVEPaxDb:Q71N54Pfam:PF02450Pfam:Q71N54
PhylomeDB:Q71N54PIR:T04767PRIDE:Q71N54PRO:PR:Q71N54ProteinModelPortal:Q71N54Proteomes:UP000006548RefSeq:NP_193721.2
SMR:Q71N54STRING:3702.AT4G19860.1SUPFAM:SSF53474TAIR:AT4G19860UniGene:At.2332UniProt:Q71N54
Coordinates (TAIR10) chr4:-:10777655..10780260
Molecular Weight (calculated) 60433.90 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.26
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLLLEEIIR SVEALLKLRN RNQEPYVDPN LNPVLLVPGI AGSILNAVDH ENGNEERVWV RIFGADHEFR TKMWSRFDPS TGKTISLDPK TSIVVPQDRA
101: GLHAIDVLDP DMIVGRESVY YFHEMIVEMI GWGFEEGKTL FGFGYDFRQS NRLQETLDQF AKKLETVYKA SGEKKINVIS HSMGGLLVKC FMGLHSDIFE
201: KYVQNWIAIA APFRGAPGYI TSTLLNGMSF VNGWEQNFFV SKWSMHQLLI ECPSIYELMC CPYFKWELPP VLELWREKES NDGVGTSYVV LESYCSLESL
301: EVFTKSLSNN TADYCGESID LPFNWKIMEW AHKTKQVLAS AKLPPKVKFY NIYGTNLETP HSVCYGNEKM PVKDLTNLRY FQPTYICVDG DGTVPMESAM
401: ADGLEAVARV GVPGEHRGIL NDHRVFRMLK KWLNVGEPDP FYNPVNDYVI LPTTYEFEKF HENGLEVASV KESWDIISDD NNIGTTGSTV NSISVSQPGD
501: DQNPQAEARA TLTVQPQSDG RQHVELNAVS VSVDA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)