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AT4G19850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lectin-related
Curator
Summary (TAIR10)
encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family.
Computational
Description (TAIR10)
phloem protein 2-A2 (PP2-A2); BEST Arabidopsis thaliana protein match is: phloem protein 2-A4 (TAIR:AT1G33920.1); Has 437 Blast hits to 437 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 437; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:13022DNASU:827729eggNOG:ENOG410JVWPeggNOG:ENOG41105HKEMBL:AL024486EMBL:AL161551EMBL:BT015604
EMBL:CP002687EnsemblPlants:AT4G19850EnsemblPlants:AT4G19850.1entrez:827729ExpressionAtlas:O81866GeneID:827729Genevisible:O81866
GO:GO:0016021hmmpanther:PTHR32278hmmpanther:PTHR32278:SF3HOGENOM:HOG000237521InterPro:IPR025886iPTMnet:O81866PaxDb:O81866
Pfam:O81866Pfam:PF14299PhylomeDB:O81866PIR:T04766PRIDE:O81866PRO:PR:O81866Proteomes:UP000006548
RefSeq:NP_193720.1STRING:3702.AT4G19850.2TAIR:AT4G19850tair10-symbols:ATPP2-A2tair10-symbols:PP2-A2tair10-symbols:PP2A2TMHMM:TMhelix
UniGene:At.51025UniProt:O81866
Coordinates (TAIR10) chr4:+:10776925..10777509
Molecular Weight (calculated) 22481.60 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.15
Length 194 amino acids
Sequence (TAIR10)
(BLAST)
001: MRVKRRKTVS CCTREISQLH GQSLKQINIG VGSLILTKHQ GYEFYCKKVT FVFFCFFKIS LNSAYLYTLY SDVRTEVAKM ERVAWLEVVG KFETEKLTPN
101: SLYEVVFVVK LIDSAKGWDF RVNFKLVLPT GETKERRENV NLLERNKWVE IPAGEFMISP EHLSGKIEFS MLEVKSDQWK SGLIVKGVAI RPKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)