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AT4G19200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.665
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proline-rich family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
proline-rich family protein; Has 23677 Blast hits to 12773 proteins in 953 species: Archae - 9; Bacteria - 5550; Metazoa - 10820; Fungi - 2264; Plants - 2677; Viruses - 157; Other Eukaryotes - 2200 (source: NCBI BLink).
Protein Annotations
EMBL:AF083724EMBL:AK227073EMBL:AL161550EMBL:AY088588EMBL:BT002527EMBL:BT006561EMBL:CP002687
EnsemblPlants:AT4G19200EnsemblPlants:AT4G19200.1entrez:827660GeneID:827660Gramene:AT4G19200.1KEGG:ath:AT4G19200OMA:NPYGHAV
PIR:A85217Proteomes:UP000006548RefSeq:NP_193655.1STRING:3702.AT4G19200.1TAIR:AT4G19200UniGene:At.43017UniProt:Q9M0L8
Coordinates (TAIR10) chr4:+:10499277..10500390
Molecular Weight (calculated) 17745.60 Da
IEP (calculated) 10.18
GRAVY (calculated) -0.91
Length 179 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGGKDKHHD EQEKGFHGFP GGGHYPPAQG GYPPQGYPPQ QGYPPAGGYP PAGYPPGAYP AAPGGYPPAP GGYPPAGYPA PGAHHSGHSG GGLGGMIAGA
101: AGAAAAAYGA HHVGHASHNP YGHAVGHGGY GHAPAHGFGH GGHGKFKHGK HGGKFKHGKH GKHGKHGMFG GGGKFKKWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)