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AT4G19140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEF2eggNOG:ENOG41124MXEMBL:BT026110EMBL:CP002687
EnsemblPlants:AT4G19140EnsemblPlants:AT4G19140.1entrez:827652GeneID:827652
GO:GO:0016021Gramene:AT4G19140.1hmmpanther:PTHR36779HOGENOM:HOG000070994
KEGG:ath:AT4G19140OMA:KHSIRVFPhylomeDB:Q147I3Proteomes:UP000006548
RefSeq:NP_567577.1STRING:3702.AT4G19140.1TAIR:AT4G19140TMHMM:TMhelix
UniGene:At.43375UniGene:At.48878UniProt:Q147I3
Coordinates (TAIR10) chr4:+:10469830..10471275
Molecular Weight (calculated) 34570.10 Da
IEP (calculated) 9.70
GRAVY (calculated) 0.19
Length 303 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSEETTSSV TTTKKQKRVF SSLALRFRTV IVFSIISFVV LSFLLGILVI FIGELWVYSS SSASASLHSR CKIVSSSVDL RSSKVCGIGL LNVKAQHVFY
101: PFERDKFRCR YDYYWASVFK VEYKDNLMGQ TRLAFSEAPN EALPPECRPN FGAALLTKDN FKVNETYDCW YTLGIPKIKL YRDSFFGCQA DDLSFTDIAK
201: QYSIVISKLL QSWLNGESTP KYWKYDVIAG IVSGFATSII TVFIIRILRH AKSWFPQACC SVKRQFSKVN ILVQVKRACL LLVYFSVLGW MATQYLKILF
301: PNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)