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AT4G18950.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.960
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Integrin-linked protein kinase family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Integrin-linked protein kinase (InterPro:IPR016253), Ankyrin repeat-containing domain (InterPro:IPR020683), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G18950-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AY058189EMBL:AY087826EMBL:AY142014EMBL:CP002687
EnsemblPlants:AT4G18950EnsemblPlants:AT4G18950.1entrez:827630Gene3D:1.25.40.20GeneID:827630GO:GO:0004712GO:GO:0005524
GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0007229Gramene:AT4G18950.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF378
HOGENOM:HOG000233857IntAct:Q93Z30InterPro:IPR000719InterPro:IPR001245InterPro:IPR002110InterPro:IPR011009InterPro:IPR020683
KEGG:ath:AT4G18950OMA:SACEGHAPfam:PF07714Pfam:PF12796Pfscan:PS50011Pfscan:PS50088Pfscan:PS50297
PhylomeDB:Q93Z30PRINTS:PR00109PROSITE:PS50011PROSITE:PS50088PROSITE:PS50297Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_567568.1SMART:SM00248SMR:Q93Z30STRING:3702.AT4G18950.1SUPFAM:SSF48403SUPFAM:SSF56112
TAIR:AT4G18950UniGene:At.1956UniProt:Q93Z30
Coordinates (TAIR10) chr4:+:10375685..10378129
Molecular Weight (calculated) 52620.70 Da
IEP (calculated) 6.00
GRAVY (calculated) -0.58
Length 459 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEDYQQPRF TIGRQSSMAP EKIPEPSVHS EEEVFEDGEE IDGGVRLMYL ANEGDIEGIK ELIDSGIDAN YRDIDDRTAL HVAACQGLKD VVELLLDRKA
101: EVDPKDRWGS TPFADAIFYK NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ VAVKKLDDEV LSDDDQVRKF
201: HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF
301: GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP
401: AKRPTFREII KRLESILHHM GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)