suba logo
AT4G18850.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.972
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL021711EMBL:AL161549EMBL:CP002687EnsemblPlants:AT4G18850EnsemblPlants:AT4G18850.1entrez:827619GeneID:827619
Gramene:AT4G18850.1KEGG:ath:AT4G18850ncoils:CoilPIR:T05022Proteomes:UP000006548RefSeq:NP_193620.1TAIR:AT4G18850
UniGene:At.65399UniProt:O49400
Coordinates (TAIR10) chr4:-:10342063..10342242
Molecular Weight (calculated) 6602.46 Da
IEP (calculated) 3.47
GRAVY (calculated) -0.78
Length 59 amino acids
Sequence (TAIR10)
(BLAST)
1: MVDLDQLQQI RDLLENIINH LEANELLPQP NPMYHDPLED LGDSPASSDV TEGSNSDED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)