AT4G18810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10322622..10325735 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65471.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.51 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||
| Length | 596 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVSSSLKLS SSLSPSIIKL QGSSSSIDIK FSKYTSLPKP FLQLDDKSRR LRDQQVSHSL ELRSYRKRVT AKSGSQGWDF GRFVKTLYFF NGPPSPLKFV 101: SSVFEKLTNG ATEEPVAEMG TSGIILVAGA TGGVGRRIVD ILRKRGLPVK ALVRNEEKAR KMLGPEIDLI VADITKENTL VPEKFKGVRK VINAVSVIVG 201: PKEGDTPERQ KYNQGVRFFE PEIKGDSPEL VEYIGMKNLI NAVRDGVGLE NGKLIFGVGD NTFKDLPWGA LDDVVMGGVS ESNFIVDLTA GENGGPTGIF 301: KGIVSTTNNG GFTSVRTKNF PEAENVSAYD GLELRLKGDG LRYKLIVRTS QDWDTVGYTA SFDTSPGQWQ SVRLPFSSLR PVFRARTVTD APPFNASSII 401: SLQLMFSKFE YDGKLNPTFK EGPFELPLSS IRAYIQDPVT PRFVHVGSAG VTRPERPGLD LSKQPPAVRL NKELDFILTY KLKGEDLIRD SGIPFAIVRP 501: CALTEEPAGA DLIFEQGDNI TGKVSRDEVA RICIAALESP YALNKTFEVK STVPFSEPFT VDPENPPPEK DYNEYFKTLK DGITGKEALE QSTVAV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)