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AT4G18650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.534
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : transcription factor-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14880.2); Has 523 Blast hits to 523 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 521; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY34eggNOG:ENOG4111BI9EMBL:BT003897EMBL:BT005177EMBL:CP002687EnsemblPlants:AT4G18650EnsemblPlants:AT4G18650.1
entrez:827599GeneID:827599GO:GO:0006351GO:GO:0043565Gramene:AT4G18650.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF143
HOGENOM:HOG000237522IntAct:Q84JC2InterPro:IPR025422KEGG:ath:AT4G18650ncoils:CoilOMA:WVIQLELPfam:PF14144
PhylomeDB:Q84JC2Proteomes:UP000006548RefSeq:NP_193600.2STRING:3702.AT4G18650.1TAIR:AT4G18650UniGene:At.32878UniProt:Q84JC2
Coordinates (TAIR10) chr4:-:10264043..10265422
Molecular Weight (calculated) 27025.30 Da
IEP (calculated) 9.75
GRAVY (calculated) -0.16
Length 232 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKMRNLVEE KFLEFYESWV IQLELYLHQL LIAHNNNTMS ETELRHLISK LTTHHKAYYT AKWAAIREDV LAFFGSVWLN PLENACSWLT GWKPSMVFRM
101: VDRLRKSRVV LVEAQVKKLE ELRVKTKFDE QKIEREMERY QVAMADRKMV ELARLGCHVG GESVMVVEAA VRGLSMGLEK MVKAADCVRL KTLKGILDIL
201: TPPQCVEFLA AAATFQVQLR RWGNRRHYVT HS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)