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AT4G18640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.951
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Required for root hair elongation during tip growth.
Computational
Description (TAIR10)
morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G18640-MONOMEREC:2.7.11.1eggNOG:ENOG410IHG1eggNOG:ENOG410ZQU1EMBL:AL035526EMBL:AL161549EMBL:CP002687
EMBL:FJ708745EnsemblPlants:AT4G18640EnsemblPlants:AT4G18640.1entrez:827598Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:827598
Genevisible:C0LGQ4GO:GO:0004674GO:GO:0005524GO:GO:0012505GO:GO:0016021GO:GO:0048765GO:GO:0090406
Gramene:AT4G18640.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF83HOGENOM:HOG000240929InParanoid:C0LGQ4InterPro:IPR000719InterPro:IPR001245
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT4G18640OMA:MWKMVDAPaxDb:C0LGQ4
Pfam:C0LGQ4Pfam:PF07714Pfam:PF08263Pfscan:PS50011PhylomeDB:C0LGQ4PIR:T04856PRIDE:C0LGQ4
PRO:PR:C0LGQ4PROSITE:PS50011ProteinModelPortal:C0LGQ4Proteomes:UP000006548RefSeq:NP_193599.3SMR:C0LGQ4STRING:3702.AT4G18640.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G18640tair10-symbols:MRH1TMHMM:TMhelixUniGene:At.32880UniProt:C0LGQ4
Coordinates (TAIR10) chr4:+:10260481..10263577
Molecular Weight (calculated) 75824.10 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.24
Length 678 amino acids
Sequence (TAIR10)
(BLAST)
001: MMGCGFHFPW FFFLIIGLQA PLSLSLTSQG SALLKFRARV NSDPHGTLAN WNVSGINDLC YWSGVTCVDG KVQILDLSGY SLEGTLAPEL SQLSDLRSLI
101: LSRNHFSGGI PKEYGSFENL EVLDLRENDL SGQIPPELSN GLSLKHLLLS GNKFSDDMRI KIVRLQSSYE VRLKKSPKLS PLAVLGCINR KLGHCVSRNR
201: IIQVKKVEAI VFRIKATSRR FLKAFPSFLE ETDIYKRREL LEETSNLAAE PAPSAPSPSP GIITEASPRS SGSFPAVTNA KKRRPPLVPP VPSPDKGSTS
301: PDISKNQPQD NKQSKGSKHV WLYVVIAVAS FVGLLIIVAV IFFCRKRAVK SIGPWKTGLS GQLQKAFVTG VPKLNRSELE TACEDFSNII ETFDGYTVYK
401: GTLSSGVEIA VASTAIAESK EWTRAMEMAY RRKIDTLSRI NHKNFVNLIG YCEEDDPFNR MMVFEYAPNG TLFEHLHDKE TEHLDWSARM RIIMGTAYCL
501: QHMHGMNPPM AHTDFNSSEI YLTDDYAAKV SEIPFNLEAR LNPKKHVSGD LEQTSLLLPP EPEANVHSFG VLMLEIISGK LSFSDEYGSI EQWASKYLEK
601: DDLGEMIDPS LKTFKEEELE VICDVIRECL KTEQRQRPSM KDVAEQLKQV INITPEKATP RSSPLWWAEL EILSSEAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)