AT4G18640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Required for root hair elongation during tip growth. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
morphogenesis of root hair 1 (MRH1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, root hair cell differentiation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G45840.2); Has 77438 Blast hits to 37028 proteins in 1172 species: Archae - 20; Bacteria - 1270; Metazoa - 6142; Fungi - 481; Plants - 65385; Viruses - 62; Other Eukaryotes - 4078 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:10260481..10263577 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75824.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 678 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMGCGFHFPW FFFLIIGLQA PLSLSLTSQG SALLKFRARV NSDPHGTLAN WNVSGINDLC YWSGVTCVDG KVQILDLSGY SLEGTLAPEL SQLSDLRSLI 101: LSRNHFSGGI PKEYGSFENL EVLDLRENDL SGQIPPELSN GLSLKHLLLS GNKFSDDMRI KIVRLQSSYE VRLKKSPKLS PLAVLGCINR KLGHCVSRNR 201: IIQVKKVEAI VFRIKATSRR FLKAFPSFLE ETDIYKRREL LEETSNLAAE PAPSAPSPSP GIITEASPRS SGSFPAVTNA KKRRPPLVPP VPSPDKGSTS 301: PDISKNQPQD NKQSKGSKHV WLYVVIAVAS FVGLLIIVAV IFFCRKRAVK SIGPWKTGLS GQLQKAFVTG VPKLNRSELE TACEDFSNII ETFDGYTVYK 401: GTLSSGVEIA VASTAIAESK EWTRAMEMAY RRKIDTLSRI NHKNFVNLIG YCEEDDPFNR MMVFEYAPNG TLFEHLHDKE TEHLDWSARM RIIMGTAYCL 501: QHMHGMNPPM AHTDFNSSEI YLTDDYAAKV SEIPFNLEAR LNPKKHVSGD LEQTSLLLPP EPEANVHSFG VLMLEIISGK LSFSDEYGSI EQWASKYLEK 601: DDLGEMIDPS LKTFKEEELE VICDVIRECL KTEQRQRPSM KDVAEQLKQV INITPEKATP RSSPLWWAEL EILSSEAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)