AT4G18260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.552 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cytochrome b561/ferric reductase transmembrane protein family | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10093524..10097337 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62365.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.75 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||
| Length | 545 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKISKSLWSV MISILFYLTS APPFVICSSL EVTIDNHSPS NLKTKGSLEQ DKLSHQMINS IKLHGILLWV SMGFLMPVGI LFIRMANKAH ENGIKVKVFF 101: YLHVIFQILA VVLATIGAIL SLRTLENSFD NNHQRLGLAL YAAMWLQFLT GVFKPSRGSK RRLRWFLLHW ILGTIVSIVG IVNIYTGIQA YQKKTSLSRD 201: SSLWTILFTV QVTCLVFFYL YQDKWEHFQK QRVVLDELDH QNNNTNGRNN QSIQVVTRND HEQKVMVPQP CRKSNALICR EREREENKMV GEEETKKRVV 301: TESLGWLTES SIMPKKHRAI EGVGPSSIME LKAQLYKSQE EAKQTKDFTG SDAQYHRAKE RIAAKDSFAA KNSGVESRNL KDKLEHKAVK DGAVSYAALE 401: KKAQLYDKLA RGELSDEEGE EKYCVDFFRK GIQHEDPKPS STYNSSISAP PEDFKQDGED DGSLFSTKFA GLGHAIGTAD VGQHVRMVRE VHEEVNQARE 501: KATELKQRRQ EQATNRREKL KQAYLRKQLE KLKAQQQQQE DEQKT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)