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AT4G18260.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.552
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome b561/ferric reductase transmembrane protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XR70eggNOG:KOG4293EMBL:AK118819EMBL:AK228989EMBL:AL021713EMBL:AL161548EMBL:CP002687
EnsemblPlants:AT4G18260EnsemblPlants:AT4G18260.1entrez:827552ExpressionAtlas:Q8GWI5GeneID:827552Genevisible:Q0WPS2Genevisible:Q8GWI5
GO:GO:0016021GO:GO:0046872GO:GO:0055114hmmpanther:PTHR23130hmmpanther:PTHR23130:SF90iPTMnet:Q8GWI5KEGG:ath:AT4G18260
ncoils:CoilPaxDb:Q8GWI5Pfam:PF03188Pfscan:PS50939PIR:T04928PRIDE:Q0WPS2PRO:PR:Q8GWI5
Proteomes:UP000006548RefSeq:NP_193560.1STRING:3702.AT4G18260.1TAIR:AT4G18257TMHMM:TMhelixUniGene:At.43247UniProt:O49729
UniProt:Q0WPS2UniProt:Q8GWI5
Coordinates (TAIR10) chr4:-:10093524..10097337
Molecular Weight (calculated) 62365.90 Da
IEP (calculated) 9.75
GRAVY (calculated) -0.51
Length 545 amino acids
Sequence (TAIR10)
(BLAST)
001: MKISKSLWSV MISILFYLTS APPFVICSSL EVTIDNHSPS NLKTKGSLEQ DKLSHQMINS IKLHGILLWV SMGFLMPVGI LFIRMANKAH ENGIKVKVFF
101: YLHVIFQILA VVLATIGAIL SLRTLENSFD NNHQRLGLAL YAAMWLQFLT GVFKPSRGSK RRLRWFLLHW ILGTIVSIVG IVNIYTGIQA YQKKTSLSRD
201: SSLWTILFTV QVTCLVFFYL YQDKWEHFQK QRVVLDELDH QNNNTNGRNN QSIQVVTRND HEQKVMVPQP CRKSNALICR EREREENKMV GEEETKKRVV
301: TESLGWLTES SIMPKKHRAI EGVGPSSIME LKAQLYKSQE EAKQTKDFTG SDAQYHRAKE RIAAKDSFAA KNSGVESRNL KDKLEHKAVK DGAVSYAALE
401: KKAQLYDKLA RGELSDEEGE EKYCVDFFRK GIQHEDPKPS STYNSSISAP PEDFKQDGED DGSLFSTKFA GLGHAIGTAD VGQHVRMVRE VHEEVNQARE
501: KATELKQRRQ EQATNRREKL KQAYLRKQLE KLKAQQQQQE DEQKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)