AT4G18250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor serine/threonine kinase, putative | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:10087343..10091963 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 95270.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.94 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 853 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLAGVLSMS ILTIENKCNH TVWPVIFSWN VDSQVSPTGF ALRRGEARAL QAPSSWYGLI SARTLCSIDS TGTFSCATGD CESGTIECPG NYGWAPVTYV 101: YFRMNSYTIS VEYGYNLPLM VVPSQRSRTC ISAGCVVELK KTCPKDLMKM SRENLVACSS TCMEFDTPEA CCTRDFKSKQ NCKPTVYTQN FERACPLAHI 201: YAYDDNNSTV TCLNSTDYVI TIITIENKCN NTIWPVIFSW RSQVSTTGFT LKTGEERAIN APSSWYGLIS ARTLCSNDST GNFSCATGDC ESGEIECPGT 301: YKWSPVTYVI FRIDDGQINS YIISLEFGYN LPLTVVPSNP ACISSGCMVD LNKTCPNDLK EFSRRGLVAC KSACRQSASD ENCCTNYFKY KQTCKPTPYV 401: QNFDRACPSA YSYPFSGNNS TFTCTNSTDY VITFCPSSIP NTTSSSMAQL PQPKHNSLRK LKPILGGSAA LIVLISIVVI ALVVRARHAK RKSELNDENI 501: EAVVMLKRYS FEKVKKMTNS FDHVIGKGGF GTVYKGKLPD ASGRDIALKI LKESKGNGEE FINELVSMSR ASHVNIVSLF GFCYEGSQRA IIYEFMPNGS 601: LDKFISENMS TKIEWKTLYN IAVGVARGLE YLHNSCVSKI VHFDIKPQNI LIDEDLCPKI SDFGLAKLCK KKESIISMLD ARGTVGYIAP EMFSKNYGGV 701: SHKSDVYSYG MVVLEMIGAT KREEVETSAT DKSSMYFPDW VYEDLERKET MRLLEDHIIE EEEEEKIVKR MTLVGLWCIQ TNPSDRPPMR KVVEMLEGSR 801: LEALQVPPKP LLNLHVVTDW ETSEDSQQTS RLSTQSLLER KTRSNYQYTV EAV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)