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AT4G18250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor serine/threonine kinase, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002687EnsemblPlants:AT4G18250EnsemblPlants:AT4G18250.1entrez:827551Gene3D:2.60.110.10
Gene3D:2.60.120.200GeneID:827551GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT4G18250.1hmmpanther:PTHR27009
hmmpanther:PTHR27009:SF21InParanoid:F4JQT1InterPro:IPR000719InterPro:IPR001245InterPro:IPR001938InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR017949KEGG:ath:AT4G18250OMA:YGLISARPaxDb:F4JQT1Pfam:PF00314
Pfam:PF07714Pfscan:PS50011Pfscan:PS51367PRIDE:F4JQT1PROSITE:PS00107PROSITE:PS00108PROSITE:PS00316
PROSITE:PS50011PROSITE:PS51367ProteinModelPortal:F4JQT1Proteomes:UP000006548RefSeq:NP_193559.2scanprosite:PS00107scanprosite:PS00108
scanprosite:PS00316SMART:SM00205SMART:SM00220SMR:F4JQT1STRING:3702.AT4G18250.1SUPFAM:SSF49870SUPFAM:SSF56112
TAIR:AT4G18250TMHMM:TMhelixUniGene:At.32927UniProt:F4JQT1
Coordinates (TAIR10) chr4:-:10087343..10091963
Molecular Weight (calculated) 95270.80 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.22
Length 853 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLAGVLSMS ILTIENKCNH TVWPVIFSWN VDSQVSPTGF ALRRGEARAL QAPSSWYGLI SARTLCSIDS TGTFSCATGD CESGTIECPG NYGWAPVTYV
101: YFRMNSYTIS VEYGYNLPLM VVPSQRSRTC ISAGCVVELK KTCPKDLMKM SRENLVACSS TCMEFDTPEA CCTRDFKSKQ NCKPTVYTQN FERACPLAHI
201: YAYDDNNSTV TCLNSTDYVI TIITIENKCN NTIWPVIFSW RSQVSTTGFT LKTGEERAIN APSSWYGLIS ARTLCSNDST GNFSCATGDC ESGEIECPGT
301: YKWSPVTYVI FRIDDGQINS YIISLEFGYN LPLTVVPSNP ACISSGCMVD LNKTCPNDLK EFSRRGLVAC KSACRQSASD ENCCTNYFKY KQTCKPTPYV
401: QNFDRACPSA YSYPFSGNNS TFTCTNSTDY VITFCPSSIP NTTSSSMAQL PQPKHNSLRK LKPILGGSAA LIVLISIVVI ALVVRARHAK RKSELNDENI
501: EAVVMLKRYS FEKVKKMTNS FDHVIGKGGF GTVYKGKLPD ASGRDIALKI LKESKGNGEE FINELVSMSR ASHVNIVSLF GFCYEGSQRA IIYEFMPNGS
601: LDKFISENMS TKIEWKTLYN IAVGVARGLE YLHNSCVSKI VHFDIKPQNI LIDEDLCPKI SDFGLAKLCK KKESIISMLD ARGTVGYIAP EMFSKNYGGV
701: SHKSDVYSYG MVVLEMIGAT KREEVETSAT DKSSMYFPDW VYEDLERKET MRLLEDHIIE EEEEEKIVKR MTLVGLWCIQ TNPSDRPPMR KVVEMLEGSR
801: LEALQVPPKP LLNLHVVTDW ETSEDSQQTS RLSTQSLLER KTRSNYQYTV EAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)