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AT4G17770.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.558
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : trehalose phosphatase/synthase 5
Curator
Summary (TAIR10)
Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.
Computational
Description (TAIR10)
trehalose phosphatase/synthase 5 (TPS5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase / trehalose-phosphatase family protein (TAIR:AT1G68020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:12791CAZy:GT20EC:2.4.1.15eggNOG:COG0380
eggNOG:COG1877eggNOG:KOG1050EMBL:AK118703EMBL:AL161547
EMBL:BT005967EMBL:CP002687EMBL:Z97344EnsemblPlants:AT4G17770
EnsemblPlants:AT4G17770.1entrez:827498ExpressionAtlas:O23617Gene3D:3.40.50.1000
GeneID:827498Genevisible:O23617GO:GO:0005992GO:GO:0016757
Gramene:AT4G17770.1gramene_pathway:2.4.1.15gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWY
hmmpanther:PTHR10788hmmpanther:PTHR10788:SF48HOGENOM:HOG000191476InParanoid:O23617
InterPro:IPR001830InterPro:IPR003337InterPro:IPR006379InterPro:IPR023214
iPTMnet:O23617KEGG:ath:AT4G17770KO:K16055OMA:REKKRFP
PaxDb:O23617Pfam:O23617Pfam:PF00982Pfam:PF02358
PhylomeDB:O23617PhylomeDB:W8PUL2PIR:H71447PRIDE:O23617
PRO:PR:O23617ProteinModelPortal:O23617Proteomes:UP000006548RefSeq:NP_567538.1
SMR:O23617STRING:3702.AT4G17770.1SUPFAM:SSF53756SUPFAM:SSF56784
TAIR:AT4G17770tair10-symbols:ATTPS5tair10-symbols:TPS5TIGRfam:TIGR00685
TIGRfam:TIGR01484TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484UniGene:At.4501
UniProt:O23617UniProt:W8PUL2
Coordinates (TAIR10) chr4:+:9877055..9880084
Molecular Weight (calculated) 97459.90 Da
IEP (calculated) 6.02
GRAVY (calculated) -0.22
Length 862 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSRSYSNLL DLASGNFHSF SREKKRFPRV ATVTGVLSEL DDDNNSNSVC SDAPSSVTQD RIIIVGNQLP IKSHRNSAGK LSFSWDNDSL LLQLKDGMRE
101: DMEVVYIGCL KEQIDTVEQD DVSQRLLENF KCVPAYIPPE LFTKYYHGFC KQHLWPLFHY MLPLTPDLGG RFDRSLWQAY LSVNKIFADK VMEVISPDDD
201: FVWVHDYHLM VLPTFLRKRF NRVKLGFFLH SPFPSSEIYR TLPVRNELLR ALLNADLIGF HTFDYARHFL SCCSRMLGLS YQSKRGTIGL EYYGRTVSIK
301: ILPVGIHISQ LQSILNLPET QTKVAELRDQ FLDQKVLLGV DDMDIFKGIS LKLLAMEQLL TQHPEKRGRV VLVQIANPAR GRGKDVQEVQ SETEATVKRI
401: NEMFGRPGYQ PVVLIDTPLQ FFERIAYYVI AECCLVTAVR DGMNLIPYEY IICRQGNPKL NETIGLDPSA AKKSMLVVSE FIGCSPSLSG AIRVNPWNID
501: AVTEAMDYAL IVSEAEKQMR HEKHHKYVST HDVAYWARSF IQDLERACGD HVRKRCWGIG FGLGFRVVAL DPSFKKLSIE HIVSAYKRTK NRAILLDYDG
601: TMVQPGSIRT TPTRETIEIL NNLSSDPKNI VYLVSGKDRR TLTEWFSSCD DLGLGAEHGY FIRPNDGTDW ETSSLVSGFE WKQIAEPVMR LYTETTDGST
701: IETKETALVW NYQFADPDFG SCQAKELMEH LESVLTNDPV SVKTGQQLVE VKPQGVNKGL VAERLLTTMQ EKGKLLDFIL CVGDDRSDED MFEVIMSAKD
801: GPALSPVAEI FACTVGQKPS KAKYYLDDTA EIIRMLDGLA ATNTTISDQT DSTATVPTKD LF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)