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AT4G17615.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcineurin B-like protein 1
Curator
Summary (TAIR10)
Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.
Computational
Description (TAIR10)
calcineurin B-like protein 1 (CBL1); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 9 processes; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Calcineurin B protein (InterPro:IPR015757), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 9 (TAIR:AT5G47100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:12774DIP:DIP-36763NeggNOG:COG5126eggNOG:KOG0034EMBL:AF076251EMBL:AK118798EMBL:AL161546
EMBL:BT005567EMBL:CP002687EMBL:Z97343EnsemblPlants:AT4G17615EnsemblPlants:AT4G17615.1entrez:827481ExpressionAtlas:O81445
Gene3D:1.10.238.10GeneID:827481Genevisible:O81445GO:GO:0005509GO:GO:0005737GO:GO:0005886GO:GO:0006970
GO:GO:0009409GO:GO:0009414GO:GO:0009651GO:GO:0009738GO:GO:0009860GO:GO:0019722GO:GO:0019900
GO:GO:0090406hmmpanther:PTHR23056hmmpanther:PTHR23056:SF41HOGENOM:HOG000233019IntAct:O81445InterPro:IPR002048InterPro:IPR011992
InterPro:IPR018247iPTMnet:O81445KEGG:ath:AT4G17615KO:K06268OMA:QFRGHEDPaxDb:O81445Pfam:O81445
Pfam:PF13202Pfam:PF13499Pfscan:PS50222PhylomeDB:O81445PIR:A71446PIR:T51356PRIDE:O81445
PRO:PR:O81445PROSITE:PS00018PROSITE:PS50222ProteinModelPortal:O81445Proteomes:UP000006548RefSeq:NP_567533.1scanprosite:PS00018
SMART:SM00054SMR:O81445STRING:3702.AT4G17615.1SUPFAM:SSF47473TAIR:AT4G17615tair10-symbols:ATCBL1tair10-symbols:CBL1
tair10-symbols:SCABP5UniGene:At.11088UniProt:O81445
Coordinates (TAIR10) chr4:+:9817142..9818995
Molecular Weight (calculated) 24555.20 Da
IEP (calculated) 4.49
GRAVY (calculated) -0.20
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)