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AT4G17580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.624
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Bax inhibitor-1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bax inhibitor-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of apoptosis, apoptosis, regulation of apoptosis; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: BAX inhibitor 1 (TAIR:AT5G47120.1); Has 1499 Blast hits to 1499 proteins in 627 species: Archae - 0; Bacteria - 825; Metazoa - 347; Fungi - 90; Plants - 93; Viruses - 11; Other Eukaryotes - 133 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111GCTeggNOG:KOG1629EMBL:CP002687EnsemblPlants:AT4G17580
EnsemblPlants:AT4G17580.1entrez:827475GeneID:827475GO:GO:0016021
GO:GO:0043066Gramene:AT4G17580.1hmmpanther:PTHR23291hmmpanther:PTHR23291:SF34
InParanoid:F4JP81InterPro:IPR006213InterPro:IPR006214KEGG:ath:AT4G17580
OMA:IMLVIDFPANTHER:PTHR23291PaxDb:F4JP81Pfam:PF01027
PROSITE:PS01243ProteinModelPortal:F4JP81Proteomes:UP000006548RefSeq:NP_193492.1
scanprosite:PS01243STRING:3702.AT4G17580.1TAIR:AT4G17580TMHMM:TMhelix
UniGene:At.54375UniProt:F4JP81
Coordinates (TAIR10) chr4:-:9789789..9791145
Molecular Weight (calculated) 27947.60 Da
IEP (calculated) 8.47
GRAVY (calculated) 0.62
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MEANGTIWSH DYLRNSHEFS PAVQNHLKRF CIVLGSHRCV IDLYLTLFFA LLASAIGAYI HMVWNIGGNV STLGFSGIMI WLRFTLYEPN MLYLLFLFAL
101: LKGASVGPMI MLVIDFDSSV LVTAFVGTAV AFVCFSAAAM LATRREYLYH GASLACCMSI LWWVQIASSI FGGSTTVVKF ELYFGLLIFV GYIVVDTQMI
201: TEKAHHGDMD YVQHSFTFFT DFASLFVQIL VLNMFRKMKK GRKDRRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)