AT4G17000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9567046..9569913 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 75345.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.12 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||
| Length | 674 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAFEHMIVD EFNEEDFYET IEAPKFVDLT APDHRPEGDD RYWFCSRVGC DQKHEEFLDS EAIYKKFVLR VMAARSPSVR LRKALYRKDF SVDPKCPNTV 101: PAKPSRSRVS KLAMISSIPQ KGNGNIRSKE VKVVSTNKNV TPKAKAKGKE SAVISSVPQK ALTERKKQMQ SPAAFRSVQN PRNATIKVSE NRVVAKALVF 201: QSPKKLVKLK RSVELSSSVK KLCNGMRKLE IDNKRNGLGV NHKVVSSASS RRPLKTREVK SRVFDSLRSQ KQIDQKDKGV STLKKRVKKK EDPVPSSDPL 301: KPYDSNGMEV EDKTSRDEEL LVENKSEELS DTSKANMNNQ LQAREDPAVI KESGLATSQK YQITEIEEKE SALASECEDK ENANIVAAID KEDIAVIKVS 401: GLDKAKQCET VEIEDKENAL PLECEKKENA TNATDVDRED DKENSSALDN NRNLDQATYP LLKKKVFGKK EICKTTQKVM TVADKCFNGK TVSAGTRVKY 501: TKPKLTNPKP FRLRTDERQI LKEANTEKKP QCTLAKEDTA SIRGFHGENL GPNHQPVRVS SFCSILMSVH RLEKNSASRL KASRGTSTKL VSENMVDCKR 601: VALGRKKQVA NKRIETAEQA SQMNGGSKEV PIINKPSVCV VASGEKRPVT VPKGPNFHCI HVPKSCTKRV ASEV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)