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AT4G16760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : acyl-CoA oxidase 1
Curator
Summary (TAIR10)
Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.
Computational
Description (TAIR10)
acyl-CoA oxidase 1 (ACX1); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: in 8 processes; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1); Has 9148 Blast hits to 9129 proteins in 1186 species: Archae - 124; Bacteria - 6076; Metazoa - 1261; Fungi - 445; Plants - 255; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2375-MONOMERBioCyc:MetaCyc:AT4G16760-MONOMERBioGrid:12674BRENDA:1.3.3.6EC:1.3.3.6eggNOG:COG1960eggNOG:KOG0136
EMBL:AF057044EMBL:AL161544EMBL:AY058849EMBL:BT001067EMBL:CP002687EMBL:Z97341EnsemblPlants:AT4G16760
EnsemblPlants:AT4G16760.1entrez:827381EvolutionaryTrace:O65202ExpressionAtlas:O65202Gene3D:1.10.540.10GeneID:827381Genevisible:O65202
GO:GO:0000062GO:GO:0001676GO:GO:0003995GO:GO:0003997GO:GO:0005777GO:GO:0006635GO:GO:0009055
GO:GO:0009506GO:GO:0009611GO:GO:0009620GO:GO:0009695GO:GO:0033539GO:GO:0046686GO:GO:0050660
GO:GO:0052890GO:GO:0055088hmmpanther:PTHR10909hmmpanther:PTHR10909:SF250HOGENOM:HOG000181256InParanoid:O65202IntAct:O65202
InterPro:IPR002655InterPro:IPR006091InterPro:IPR009075InterPro:IPR009100InterPro:IPR012258InterPro:IPR013786InterPro:IPR029320
KEGG:00071+1.3.3.6KEGG:00592+1.3.3.6ncoils:CoilOMA:NCAQNIGPaxDb:O65202PDB:1W07PDBsum:1W07
Pfam:O65202Pfam:PF01756Pfam:PF02770Pfam:PF14749PhylomeDB:O65202PIR:H71434PIR:T52121
PIRSF:PIRSF000168PRIDE:O65202PRO:PR:O65202ProteinModelPortal:O65202Proteomes:UP000006548Reactome:R-ATH-193368Reactome:R-ATH-2046106
Reactome:R-ATH-389887Reactome:R-ATH-390247RefSeq:NP_567513.4SMR:O65202STRING:3702.AT4G16760.1SUPFAM:SSF47203SUPFAM:SSF56645
TAIR:AT4G16760tair10-symbols:ACX1tair10-symbols:ATACX1UniGene:At.20864UniProt:O65202
Coordinates (TAIR10) chr4:-:9424930..9428689
Molecular Weight (calculated) 74306.20 Da
IEP (calculated) 7.72
GRAVY (calculated) -0.21
Length 664 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVSDRIAR LVASDPVFEK SNRARLSRKE LFKSTLRKCA HAFKRIIELR LNEEEAGRLR HFIDQPAYVD
101: LHWGMFVPAI KGQGTEEQQK KWLSLANKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD EFVIHTPTQT ASKWWPGGLG KVSTHAVVYA RLITNGKDYG
201: IHGFIVQLRS LEDHSPLPNI TVGDIGTKMG NGAYNSMDNG FLMFDHVRIP RDQMLMRLSK VTREGEYVPS DVPKQLVYGT MVYVRQTIVA DASNALSRAV
301: CIATRYSAVR RQFGAHNGGI ETQVIDYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTE RLAASDFATL PEAHACTAGL KSLTTTATAD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVAQLGSGKV PVGTTAYMGR AAHLLQCRSG VQKAEDWLNP DVVLEAFEAR ALRMAVTCAK
501: NLSKFENQEQ GFQELLADLV EAAIAHCQLI VVSKFIAKLE QDIGGKGVKK QLNNLCYIYA LYLLHKHLGD FLSTNCITPK QASLANDQLR SLYTQVRPNA
601: VALVDAFNYT DHYLNSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYQEY LRPVLQQQLR TARL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)