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AT4G16330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G38240.1); Has 7952 Blast hits to 7926 proteins in 962 species: Archae - 0; Bacteria - 1043; Metazoa - 109; Fungi - 777; Plants - 4832; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3491eggNOG:KOG0143EMBL:CP002687EnsemblPlants:AT4G16330EnsemblPlants:AT4G16330.1entrez:827327ExpressionAtlas:F4JLS3
Gene3D:2.60.120.330GeneID:827327GO:GO:0016491GO:GO:0046872Gramene:AT4G16330.1gramene_pathway:1.14.11.9gramene_pathway:PWY-5152
gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYNhmmpanther:PTHR10209hmmpanther:PTHR10209:SF226InterPro:IPR005123InterPro:IPR027443PaxDb:F4JLS3
Pfam:PF03171Pfscan:PS51471PRIDE:F4JLS3PROSITE:PS51471ProteinModelPortal:F4JLS3Proteomes:UP000006548RefSeq:NP_567491.5
SMR:F4JLS3STRING:3702.AT4G16330.2SUPFAM:SSF51197TAIR:AT4G16330UniGene:At.4407UniProt:F4JLS3
Coordinates (TAIR10) chr4:-:9226298..9227235
Molecular Weight (calculated) 28892.10 Da
IEP (calculated) 5.32
GRAVY (calculated) -0.36
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSLGLSFFQ DSPMEEKLRY ACDSTSAASE GYGSRMLLGA KDDVVLDWRD YFDHHTFPPS RRNPSHWPIH PSDYRQVVGE YGDEMKKLAQ MLLGLISESL
101: GLPCSSIEEA VGEIYQNITV TYYPPCPQPE LTLGLQSHSD FGAITLLIQD DVEGLQLYKD AQWLTVPPIS DAILILIADQ TEIITNGRYK SAQHRAVTNA
201: NRARLSVATF HDPSKTARIA PVSQLSPPSY KEVVYGQYVS SWYSKGPEGK RNLDALLY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)