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AT4G16240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.544
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 17010 Blast hits to 4557 proteins in 509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537; Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes - 1688 (source: NCBI BLink).
Protein Annotations
EMBL:AL161543EMBL:CP002687EMBL:Z97340EnsemblPlants:AT4G16240
EnsemblPlants:AT4G16240.1entrez:827318GeneID:827318Gramene:AT4G16240.1
KEGG:ath:AT4G16240PIR:A71429Proteomes:UP000006548RefSeq:NP_193359.1
TAIR:AT4G16240UniGene:At.4403UniProt:O23471
Coordinates (TAIR10) chr4:-:9192336..9192568
Molecular Weight (calculated) 3516.12 Da
IEP (calculated) 9.30
GRAVY (calculated) 0.14
Length 42 amino acids
Sequence (TAIR10)
(BLAST)
1: MAAKIYLLEI SGGAGGGGGH GGGAGGGFGG GAGGGGGHGA RF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)