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AT4G16210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:24130194 (2013): peroxisome
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
FP Images

onion epidermal cell layer (peroxisomal marker)

At4g-GFP-16210
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : enoyl-CoA hydratase/isomerase A
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G16210-MONOMEREC:4.2.1.17eggNOG:COG1024eggNOG:KOG1680EMBL:AL161543EMBL:BT012519EMBL:BT014955
EMBL:CP002687EMBL:Z97340EnsemblPlants:AT4G16210EnsemblPlants:AT4G16210.1entrez:827314Gene3D:3.90.226.10GeneID:827314
GO:GO:0004300GO:GO:0005777GO:GO:0006635Gramene:AT4G16210.1gramene_pathway:4.2.1.116gramene_pathway:4.2.1.17gramene_pathway:ILEUDEG-PWY
gramene_pathway:PWY-3941gramene_pathway:PWY-5136gramene_pathway:PWY-5138gramene_pathway:VALDEG-PWYhmmpanther:PTHR11941hmmpanther:PTHR11941:SF72HOGENOM:HOG000027939
InterPro:IPR001753InterPro:IPR029045KEGG:ath:AT4G16210OMA:FRKMQEFPaxDb:Q6NL24Pfam:PF00378PhylomeDB:Q6NL24
PIR:F71428ProteinModelPortal:Q6NL24Proteomes:UP000006548RefSeq:NP_193356.2SMR:Q6NL24STRING:3702.AT4G16210.1SUPFAM:SSF52096
TAIR:AT4G16210tair10-symbols:E-COAH-2tair10-symbols:ECHIAUniGene:At.33100UniPathway:UPA00659UniProt:Q6NL24
Coordinates (TAIR10) chr4:-:9176864..9177978
Molecular Weight (calculated) 28820.10 Da
IEP (calculated) 9.68
GRAVY (calculated) -0.09
Length 265 amino acids
Sequence (TAIR10)
(BLAST)
001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)