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AT4G16190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23738689 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Papain family cysteine protease
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Papain family cysteine protease; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G39090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G16190-MONOMEReggNOG:COG4870eggNOG:KOG1542EMBL:AK226366EMBL:AL161543EMBL:AY039556EMBL:AY129473
EMBL:AY136316EMBL:BT000733EMBL:CP002687EMBL:Z97340EnsemblPlants:AT4G16190EnsemblPlants:AT4G16190.1entrez:827311
GeneID:827311GO:GO:0005773GO:GO:0008234Gramene:AT4G16190.1hmmpanther:PTHR12411hmmpanther:PTHR12411:SF365HOGENOM:HOG000230774
InterPro:IPR000169InterPro:IPR000668InterPro:IPR013128InterPro:IPR013201InterPro:IPR025661KEGG:ath:AT4G16190KO:K01373
MEROPS:C01.A06OMA:PLKIFCNPANTHER:PTHR12411Pfam:PF00112Pfam:PF08246PhylomeDB:Q9SUL1PIR:D71428
PRINTS:PR00705PROSITE:PS00139PROSITE:PS00640Proteomes:UP000006548Reactome:R-ATH-2132295RefSeq:NP_567489.1scanprosite:PS00139
scanprosite:PS00640SMART:SM00645SMART:SM00848SMR:Q9SUL1STRING:3702.AT4G16190.1SUPFAM:SSF54001TAIR:AT4G16190
TMHMM:TMhelixUniGene:At.25555UniProt:Q9SUL1
Coordinates (TAIR10) chr4:+:9171512..9172877
Molecular Weight (calculated) 41266.10 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.25
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)