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AT4G15700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.343
golgi 0.325
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Thioredoxin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15690.1); Has 1720 Blast hits to 1715 proteins in 241 species: Archae - 0; Bacteria - 36; Metazoa - 499; Fungi - 318; Plants - 755; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Protein Annotations
BioGrid:12541eggNOG:COG0695eggNOG:KOG1752EMBL:AL161542EMBL:BT010804EMBL:BT011292EMBL:CP002687
EMBL:FJ611911EMBL:Z97339EnsemblPlants:AT4G15700EnsemblPlants:AT4G15700.1entrez:827247Gene3D:3.40.30.10GeneID:827247
Genevisible:O23421GO:GO:0005634GO:GO:0005737GO:GO:0009055GO:GO:0015035GO:GO:0045454GO:GO:0046872
GO:GO:0051537Gramene:AT4G15700.1hmmpanther:PTHR10168hmmpanther:PTHR10168:SF115HOGENOM:HOG000095204InParanoid:O23421IntAct:O23421
InterPro:IPR002109InterPro:IPR011905InterPro:IPR012336InterPro:IPR014025KEGG:ath:AT4G15700OMA:ASSCCMCPaxDb:O23421
Pfam:O23421Pfam:PF00462Pfscan:PS51354PhylomeDB:O23421PIR:B71422PRINTS:PR00160PRO:PR:O23421
PROSITE:PS51354ProteinModelPortal:O23421Proteomes:UP000006548RefSeq:NP_193305.1SMR:O23421STRING:3702.AT4G15700.1SUPFAM:SSF52833
TAIR:AT4G15700TIGRfam:TIGR02189TIGRFAMs:TIGR02189UniGene:At.43586UniProt:O23421
Coordinates (TAIR10) chr4:+:8937545..8937853
Molecular Weight (calculated) 11168.90 Da
IEP (calculated) 8.08
GRAVY (calculated) 0.29
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MENLQKMISE KSVVIFSKNS CCMSHTIKTL FLDLGVNPTI YELDEISRGK EIEHALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)