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AT4G15650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; Has 5184 Blast hits to 3451 proteins in 562 species: Archae - 30; Bacteria - 838; Metazoa - 1576; Fungi - 798; Plants - 319; Viruses - 111; Other Eukaryotes - 1512 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JW7QeggNOG:ENOG411056UEMBL:CP002687EnsemblPlants:AT4G15650EnsemblPlants:AT4G15650.1entrez:827242GeneID:827242
Gramene:AT4G15650.1InParanoid:F4JK69KEGG:ath:AT4G15650OMA:TENDDIAPaxDb:F4JK69PRIDE:F4JK69ProteinModelPortal:F4JK69
Proteomes:UP000006548RefSeq:NP_193300.2TAIR:AT4G15650UniGene:At.54341UniProt:F4JK69
Coordinates (TAIR10) chr4:+:8922632..8923815
Molecular Weight (calculated) 28245.40 Da
IEP (calculated) 3.72
GRAVY (calculated) -0.93
Length 261 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCGKSKHDV VTGNTTRIKK PSEAESVKGK DSEAIKRQES CRCQETNDVS AVVPGDQPET TVENNSKKPE EKEDGGDCSE EMAVDNANGD KQPEEKETAA
101: SFPPVTAVEA IVPENIVTEE TVNDVNESVS PVEEQKEKID IDTVVEEKSV EDEKDGDVDT EIASSEVEEP IPEVHTPVTT ELEAQEIPTT ETDEIAATEN
201: DDIAATENDD IAATENDDIA ATDNDDITAR ENDEIPVLKD EDKVDVVEEN SANITKEVES A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)