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AT4G15640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (mitochondrial marker)

At4g15640-GFP
(full-length)
mitochondrial marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:827241eggNOG:ENOG410IF6JeggNOG:ENOG41128ZUEMBL:BT025313
EMBL:CP002687EnsemblPlants:AT4G15640EnsemblPlants:AT4G15640.1entrez:827241
GeneID:827241GO:GO:0005739Gramene:AT4G15640.1hmmpanther:PTHR24015
hmmpanther:PTHR24015:SF846HOGENOM:HOG000070490KEGG:ath:AT4G15640OMA:LMEEVMQ
PhylomeDB:Q1JPP0Proteomes:UP000006548RefSeq:NP_193299.3STRING:3702.AT4G15640.1
TAIR:AT4G15640UniGene:At.33160UniProt:Q1JPP0
Coordinates (TAIR10) chr4:-:8919245..8921852
Molecular Weight (calculated) 43912.60 Da
IEP (calculated) 8.85
GRAVY (calculated) -0.31
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFLQNSRRI ATVLKPIVTT ETNLRFFSSA SQISRSFQWR SQASSSSSVL KGIDSSSHLS SMSLLIPRSS FTSEAEKLAG NPTVTVKDLH DKMLNSVNVK
101: RSMPPNAWLW LLIENCQNQD DIHLLFDVLQ NLRRFRLSNL RIHDNFNCNL CQQVAKTCVR VGAIDSGKKA LWKHNVHGLT PSVASAHHLM SYALEHKNSE
201: LMEEVMQLLK TNDLPLQPGT ADLVFRICHD TDKWDLLAKY SKKFSKAGVK LRKTTFDVWM EFAAKRGDTE SLWKVDKQRS ETYSQHTLST AFSCAKGFLL
301: ESKPEEAAAV IQIICQAYPD EKKSAISTEF EKLVNEWPVD VIKHQTDEDK KALAASLKSV IPSMVNTLLS SGLKVSVDLD ELNKNEALLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)