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AT4G15530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
plastid 0.500
ASURE: cytosol,plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : pyruvate orthophosphate dikinase
Curator
Summary (TAIR10)
The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.
Computational
Description (TAIR10)
pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PEP-utilising enzyme, mobile domain (InterPro:IPR008279), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121); Has 15301 Blast hits to 15212 proteins in 2599 species: Archae - 294; Bacteria - 9981; Metazoa - 12; Fungi - 19; Plants - 160; Viruses - 0; Other Eukaryotes - 4835 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0574eggNOG:ENOG410IIM3EMBL:AK230049EnsemblPlants:AT4G15530EnsemblPlants:AT4G15530.1entrez:827226ExpressionAtlas:Q0WLY6
Gene3D:3.20.20.60Gene3D:3.50.30.10GO:GO:0006090GO:GO:0016301GO:GO:0050242gramene_pathway:2.7.9.1gramene_pathway:PWY-6549
hmmpanther:PTHR22931hmmpanther:PTHR22931:SF9HOGENOM:HOG000039664InterPro:IPR000121InterPro:IPR008279InterPro:IPR010121InterPro:IPR015813
InterPro:IPR018274InterPro:IPR023151KEGG:00620+2.7.9.1KEGG:00710+2.7.9.1KEGG:00720+2.7.9.1PANTHER:PTHR22931:SF9PaxDb:Q0WLY6
Pfam:PF00391Pfam:PF01326Pfam:PF02896PRIDE:Q0WLY6PROSITE:PS00370PROSITE:PS00742scanprosite:PS00370
scanprosite:PS00742STRING:3702.AT4G15530.5SUPFAM:SSF51621SUPFAM:SSF52009SUPFAM:SSF56059tair10-symbols:PPDKTIGRfam:TIGR01828
UniProt:Q0WLY6
Coordinates (TAIR10) chr4:-:8864828..8870727
Molecular Weight (calculated) 104211.00 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.17
Length 956 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSMIVKTTP ELFKGNGVFR TDHLGENRMV SRSNRLGDGS NRFPRTGTIH CQRLSIAKTG LHRETKARAI LSPVSDPAAS IAQKRVFTFG KGRSEGNKGM
101: KSLLGGKGAN LAEMASIGLS VPPGLTISTE ACQQYQIAGK KLPEGLWEEI LEGLSFIERD IGASLADPSK PLLLSVRSGA AISMPGMMDT VLNLGLNDQV
201: VVGLAAKSGE RFAYDSFRRF LDMFGDVVMG IPHAKFEEKL ERMKERKGVK NDTDLSAADL KELVEQYKSV YLEAKGQEFP SDPKKQLELA IEAVFDSWDS
301: PRANKYRSIN QITGLKGTAV NIQCMVFGNM GDTSGTGVLF TRNPSTGEKK LYGEFLVNAQ GEDVVAGIRT PEDLDTMKRF MPEAYAELVE NCNILERHYK
401: DMMDIEFTVQ EERLWMLQCR AGKRTGKGAV KIAVDMVGEG LVEKSSAIKM VEPQHLDQLL HPQFHDPSGY REKVVAKGLP ASPGAAVGQV VFTAEEAEAW
501: HSQGKTVILV RTETSPDDVG GMHAAEGILT ARGGMTSHAA VVARGWGKCC IAGCSEIRVD ENHKVLLIGD LTINEGEWIS MNGSTGEVIL GKQALAPPAL
601: SPDLETFMSW ADAIRRLKVM ANADTPEDAI AARKNGAQGI GLCRTEHMFF GADRIKAVRK MIMAVTTEQR KASLDILLPY QRSDFEGIFR AMDGLPVTIR
701: LLDPPLHEFL PEGDLDNIVH ELAEETGVKE DEVLSRIEKL SEVNPMLGFR GCRLGISYPE LTEMQARAIF EAAASMQDQG VTVIPEIMVP LVGTPQELGH
801: QVDVIRKVAK KVFAEKGHTV SYKVGTMIEI PRAALIADEI AKEAEFFSFG TNDLTQMTFG YSRDDVGKFL PIYLAKGILQ HDPFEVLDQQ GVGQLIKMAT
901: EKGRAARPSL KVGICGEHGG DPSSVGFFAE AGLDYVSCSP FRVPIARLAA AQVVVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)