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AT4G15470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.615
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Bax inhibitor-1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:12515eggNOG:COG0670eggNOG:KOG2322EMBL:AL161541EMBL:AY050443EMBL:AY056115EMBL:AY097356
EMBL:CP002687EMBL:Z97339EnsemblPlants:AT4G15470EnsemblPlants:AT4G15470.1entrez:827218GeneID:827218Genevisible:Q94A20
GO:GO:0016021Gramene:AT4G15470.1hmmpanther:PTHR23291hmmpanther:PTHR23291:SF31HOGENOM:HOG000060393InterPro:IPR006214KEGG:ath:AT4G15470
KO:K06890OMA:MIPLYHYPANTHER:PTHR23291PaxDb:Q94A20Pfam:PF01027Pfam:Q94A20PhylomeDB:Q94A20
PIR:C71419PRIDE:Q94A20PRO:PR:Q94A20ProteinModelPortal:Q94A20Proteomes:UP000006548RefSeq:NP_567466.1SMR:Q94A20
STRING:3702.AT4G15470.1TAIR:AT4G15470TMHMM:TMhelixUniGene:At.20495UniProt:Q94A20
Coordinates (TAIR10) chr4:+:8843661..8845505
Molecular Weight (calculated) 28170.00 Da
IEP (calculated) 6.77
GRAVY (calculated) 0.78
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKPYGYASV SMSGIDRSAG KDIDLEMGVG EATLYPGLSY GENQLRWGFI RKVYGILSAQ LLLTTLISAV VVLNPPVNDL LTGSPGILLF LCIVPFILIW
101: PLHIYHQKHP VNLILLALFT VSLSFTVGVS CAMTEGRIVL QALILTLSVV GSLTAYTFWA AKKGKDFSFL GPILFTSLII LVVTSFIQMF FPLGPTSVAV
201: YGGFSALVFC GYIVYDTDNL IKRFTYDEYI LASVALYLDI LNLFLTILRI LRQGDN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)