AT4G15290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cellulose synthase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATCSLB05; FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2274 Blast hits to 2142 proteins in 418 species: Archae - 1; Bacteria - 625; Metazoa - 0; Fungi - 5; Plants - 1626; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:8721693..8726599 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85205.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.44 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 757 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSSSSLHP LCERISHKSY VLRAVDLTIL GLLYSLLLYR ILHISENDNV WLLAFFCESC FSLVWLIFTC LKWSPAEDIP YINTLNERVH DLPSLDMFVP 101: TADTVRESPI ITVNTVLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFVKIWAPFC KKYNVRVRAP FRYFLNPLVA TDDSVFSKDW KMMKREYVKL 201: CRKVEDATGD SHWLDADDDF EAFSNTKPND HSTIVKVVWE NKGGVGDEKE VPHLVYISRE KRPNYLHHYK TGAMNFLLRV SGLMTNAPYT LNVDCDMYAN 301: EPDVVRQAMC VFLQNSKNSN HCAFVQFPQK FYDSYTNELA VLQSILGRGV AGIQGPFYIG TGCFHTRRVM YGLSSDDLED NGNISQVATR EFLAEDSLVR 401: KYGNSKELVK SVVDALQRKS NPQKSLANLI EAAQEVGHCH YEYQTSWGNL GWMYDSVAED INTSVGIHLR GWTSSFISPD PPAFIGSTPT LGLEAIVQQR 501: RWATGAIEVL FNKQSPFMGM FHGKIKFRQR LAYFWALMCL RSIPELIYCL LPAYCLLHDS ALFPKGPCLC TIVTLVGMHC LYSLWQFMSL GFSVQSWYVV 601: QSLWRIIATS SWLFSIQDII LKLLGISQIG FVIAKKTIPE TKSVYESKPS QGEDDVPKLN LGKFEFDSSG LFIPGTFIML VNLAALAGYL VRLQRSSCSH 701: GGGGSGLAEA CGCILVVMLF LPFLKGLFEH GKYSIPLSTL SKAAFLTVLF VFFCVGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)