suba logo
AT4G15150.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.689
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; Has 7282 Blast hits to 3119 proteins in 353 species: Archae - 2; Bacteria - 3076; Metazoa - 1881; Fungi - 207; Plants - 1473; Viruses - 174; Other Eukaryotes - 469 (source: NCBI BLink).
Protein Annotations
EMBL:AL161540EMBL:CP002687EMBL:Z97338EnsemblPlants:AT4G15150EnsemblPlants:AT4G15150.1entrez:827181GeneID:827181
Gramene:AT4G15150.1KEGG:ath:AT4G15150PIR:D71415Proteomes:UP000006548RefSeq:NP_193251.1TAIR:AT4G15150UniGene:At.65381
UniProt:O23369
Coordinates (TAIR10) chr4:-:8641672..8642278
Molecular Weight (calculated) 9783.79 Da
IEP (calculated) 11.68
GRAVY (calculated) -0.22
Length 102 amino acids
Sequence (TAIR10)
(BLAST)
001: MMPDKFSDIL NKRFSLKDLG IDQATRADAG LTVIGVGVSG GGRGLKKPGG GGGGGGATSG GGSNSGVGGR GRLTGTGFGV TGIGLGRKAF GEGLKGKTFG
101: RA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)