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AT4G14980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine/Histidine-rich C1 domain family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: shoot apex, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G54050.1); Has 1362 Blast hits to 671 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 11; Plants - 1277; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JT8IeggNOG:ENOG4110836EMBL:CP002687EnsemblPlants:AT4G14980EnsemblPlants:AT4G14980.1entrez:827157GeneID:827157
GO:GO:0005622GO:GO:0008270GO:GO:0035556GO:GO:0047134Gramene:AT4G14980.1hmmpanther:PTHR32410hmmpanther:PTHR32410:SF152
InParanoid:F4JIJ2InterPro:IPR002219InterPro:IPR004146InterPro:IPR011424KEGG:ath:AT4G14980OMA:HIECGSPPaxDb:F4JIJ2
Pfam:PF03107Pfam:PF07649Pfscan:PS50081PRIDE:F4JIJ2PROSITE:PS50081ProteinModelPortal:F4JIJ2Proteomes:UP000006548
RefSeq:NP_193234.4SMART:SM00109SMR:F4JIJ2STRING:3702.AT4G14980.1SUPFAM:SSF57889TAIR:AT4G14980UniGene:At.33224
UniProt:F4JIJ2
Coordinates (TAIR10) chr4:-:8561970..8563607
Molecular Weight (calculated) 62331.70 Da
IEP (calculated) 6.59
GRAVY (calculated) -0.25
Length 545 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSTESEIET RPNLLVPLHE HPLSCTEEFI YSCDFCNSRN GIAYQCTECG YRLHKDCIQG FLSYPSPCGH SLKISMPNKS PQYANDRCHF CLCKLKTPFA
101: RCTVCNINIS PLCMVKQPPL TICNPKHHKH SLTLLVRLVI FTCNACGVEG DRNPYVCLQC NLMVHKDCIE NLPRVICINR HDHRIFHTFH LGQREEHWEC
201: GVCRKTVDWV YGAFKCSRCP NYAVHSRCAT KKEVWDGIEL EDVPEEEEEV EEPFVVINEK EIIHFSHEEH VLRLDENYVT DNVNMRCRGC VLAINGDSCY
301: KCVECDYILH KACASLPRKK RHLLHNHKLT LQVDEAASSD FVCTACRTYS NGFRYKCFEG CEDDVVYDVR CSSVSEPFQH DLHPHPLYWT LESSKRCQAC
401: GTETDDNLLN CTVCDDYALC MKCATLPRKV KHRCDDHFLS LCQGVGNASG NLWCDICETK TDPNVCYYTC EECGLSLHLN CVLGDFYYVK VIPDQPKVFA
501: NNGVTRLFCG VCEVRCKFPF IMWGAVGDFT GYVCSINCVF PKADK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)