AT4G14970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; Has 257 Blast hits to 164 proteins in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8553854..8561664 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 166807.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.68 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||
| Length | 1489 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVFLSRKKPP PPPSSSSAAP SLKIPQPQKE SVEPDAVEKM TAILAEVGCT LMNPYGPPCL PSDLHAFRRN LTGRLSSFSA NSGERDNVGA LCSVFVAGFS 0101: LYIQSPSNLR RMLSSSSTTK RDESLVRNLL LVSPIQLDIQ EMLLEKLPEY FDVVTGCSLE EDVARLIINH FRWLDFIVNP HVFTDKLMQV LSICPLHLKK 0201: EIIGSLPEII GDHNCQAVVD SLEKMLQEDS AVVVAVLDSF SNLNLDDQLQ EQAITVAISC IRTIDGEHMP YLLRFLLLAA TPVNVRRIIS QIREQLKFTG 0301: MSQPCASQNK LKGKVPAYNA EGSILHALRS SLRFKNILCQ EIIKELNSLE KPRDFKVIDV WLLILMYMNG DPVRKSIEKI FKKKVVDECI QEALLDQCIG 0401: GNKEFVKDNF ASFVSLAEHL LSSKEEKARE IGSHIYSRLF EEFTDNYSRQ EILGALVTHV GSDNKFEVSS VLEMMTALVK KYAQQLLPFS SHINGISGTC 0501: ILDYLEGFTI DNLHKVYEVF SLLALSARAS GDSFRSSISN ELMMIVRKQV SHPDLKYKKM GLVGSLRIVS SLGDAKSVPD FSSSQVSDCG EILELLKTSV 0601: ESCRQSNLAL IMFYDEFATI LSHKLLQPEI MEWIGKHLGE FESLFLADLE NEKMAEKGSY SGLEGDLWMN LDGSISPICL NILALASSSS ESCCLQILPS 0701: NFLLLSTVER LTNDGSLAGV DALLGCPLHL PSSKYFAAAG WQSLAKKQKE ILSLSLYYAA NWIRELLNAF SSQIDEKIGC ISQATVKDVT TKLLKRLRNL 0801: VFLESLLSNL ITLSPQSLPE LHPYSESHVE HPRKKNEKRK LDDDASQRKV SMKNNLKKSK HSDVNEKLRQ PTIMDAFKKA GAVMSHSQTQ LRGTPSLPSM 0901: DGSTAAGSMD ENCSDNESLI VKIPQVSSAL EAQRFKFRPL LPQCLSILNF PKVLSQDMGS PEYRAELPLY LYLLHDLHTK LDCLVPPGKQ HPFKRGSAPG 1001: YFGRFKLVEL LNQIKRLFPS LRIHLNIAIS LLIRGDETSQ TTWRDEFALS GNPNTSSIVV SESLVYTMVC KEVLYCFSKI LTLPEFETDK SLLLNLLEAF 1101: QPTEIPVANF PDFQPFPSPG TKEYLYIGVS YFFEDILNKG NYFCSFTDDF PYPCSFSFDL AFECLLTLQL VVTSVQKYLG KVSEEANRKR NPGHFHGLVP 1201: NLHAKLGTSA EKLLRHKWVD ESTDNKGLKN KVCPFVSNLR IVQFTGEMVQ TILRIYLEAS GSTSDLLDEL ACTILPQASL SKSTGEDDDA RDHEFPTLCA 1301: ATFRGWYKTL LEENLAILNK LVKTVSSEKR QNCQPKTTEA HLKNIQKTVN VVVSLVNLCR SHEKVTIHGM AIKYGGKYVD SFLKVFDFLE AHFQDHKELV 1401: IQLGMKQTAI TSKIPATKRS LERFLFHVKA LLHRTSGGSN FWMGSLKHKD LRGQIVSSQA YIDNEADEVE ETMSGEEEPM QEDELPLTP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)