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AT4G14910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HISTIDINE BIOSYNTHESIS 5B
Curator
Summary (TAIR10)
Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis
Computational
Description (TAIR10)
HISTIDINE BIOSYNTHESIS 5B (HISN5B); FUNCTIONS IN: imidazoleglycerol-phosphate dehydratase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Imidazoleglycerol-phosphate dehydratase, conserved site (InterPro:IPR020565), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Imidazoleglycerol-phosphate dehydratase (InterPro:IPR000807); BEST Arabidopsis thaliana protein match is: imidazoleglycerol-phosphate dehydratase (TAIR:AT3G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1999-MONOMERBioCyc:ARA:GQT-2000-MONOMERBioGrid:12446DIP:DIP-61567N
EC:4.2.1.19eggNOG:COG0131eggNOG:KOG3143EMBL:AL161540
EMBL:AY048237EMBL:AY094021EMBL:CP002687EMBL:Z97337
EnsemblPlants:AT4G14910EnsemblPlants:AT4G14910.1entrez:827149ExpressionAtlas:O23346
GeneID:827149Genevisible:O23346GO:GO:0000105GO:GO:0004424
GO:GO:0009507GO:GO:0046872gramene_pathway:4.2.1.19gramene_pathway:HISTSYN-PWY
gramene_plant_reactome:1119509gramene_plant_reactome:6874480HAMAP:MF_00076hmmpanther:PTHR23133
hmmpanther:PTHR23133:SF4HOGENOM:HOG000228064InParanoid:O23346InterPro:IPR000807
InterPro:IPR020565InterPro:IPR020568iPTMnet:O23346KEGG:00340+4.2.1.19
PaxDb:O23346PDB:4MU0PDB:4MU1PDB:4MU3
PDB:4MU4PDB:4QNJPDB:4QNKPDBsum:4MU0
PDBsum:4MU1PDBsum:4MU3PDBsum:4MU4PDBsum:4QNJ
PDBsum:4QNKPfam:O23346Pfam:PF00475PhylomeDB:O23346
PIR:D71412PRIDE:O23346PRO:PR:O23346PROSITE:PS00954
PROSITE:PS00955ProteinModelPortal:O23346Proteomes:UP000006548RefSeq:NP_567448.1
scanprosite:PS00954scanprosite:PS00955SMR:O23346STRING:3702.AT4G14910.2
SUPFAM:SSF54211TAIR:AT4G14910tair10-symbols:HISN5BUniGene:At.4308
UniPathway:UPA00031UniProt:O23346
Coordinates (TAIR10) chr4:-:8528451..8530105
Molecular Weight (calculated) 29425.90 Da
IEP (calculated) 7.54
GRAVY (calculated) -0.32
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MELLSSSPAQ LLRPNLSSRA LLPPRTSIAS SHPPPPRFLV MNSQSQHRPS ISCASPPPGD NGFPAITTAS PIESARIGEV KRETKETNVS VKINLDGHGV
101: SDSSTGIPFL DHMLDQLASH GLFDVHVRAT GDTHIDDHHT NEDVALAIGT ALLKALGERK GINRFGDFTA PLDEALIHVS LDLSGRPYLG YNLEIPTQRV
201: GTYDTQLVEH FFQSLVNTSG MTLHIRQLAG KNSHHIIEAT FKAFARALRQ ATESDPRRGG TIPSSKGVLS RS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)