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AT4G14870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : secE/sec61-gamma protein transport protein
Curator
Summary (TAIR10)
Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.
Computational
Description (TAIR10)
secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein secretion, protein targeting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein secE/sec61-gamma protein (InterPro:IPR001901), SecE subunit of protein translocation complex (InterPro:IPR005807); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0E3eggNOG:ENOG4112D2PEMBL:AL161540EMBL:AY045827EMBL:AY096484EMBL:CP002687EMBL:Z97337
EnsemblPlants:AT4G14870EnsemblPlants:AT4G14870.1entrez:827144GeneID:827144Genevisible:O23342GO:GO:0006605GO:GO:0009306
GO:GO:0009507GO:GO:0009535GO:GO:0015450GO:GO:0016021Gramene:AT4G14870.1HAMAP:MF_00422hmmpanther:PTHR37240
HOGENOM:HOG000240710InParanoid:O23342IntAct:O23342InterPro:IPR001901InterPro:IPR005807InterPro:IPR022943iPTMnet:O23342
KEGG:ath:AT4G14870ncoils:CoilOMA:VKEIEWPPaxDb:O23342Pfam:O23342Pfam:PF00584PhylomeDB:O23342
PIR:H71411PRIDE:O23342PRO:PR:O23342ProteinModelPortal:O23342Proteomes:UP000006548RefSeq:NP_567446.1SMR:O23342
STRING:3702.AT4G14870.1TAIR:AT4G14870tair10-symbols:SECE1TCDB:3.A.5.4.2TIGRfam:TIGR00964TIGRFAMs:TIGR00964TMHMM:TMhelix
UniGene:At.4305UniProt:O23342
Coordinates (TAIR10) chr4:+:8517248..8517781
Molecular Weight (calculated) 19121.60 Da
IEP (calculated) 4.60
GRAVY (calculated) -0.17
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLTAQFSPP VTGITRSLRD TKPSLSNLRV FPVYTEIRTM TTSNLRKSAC FVAKAIEQRR DTAGSESESE ATPSPAEESG SGEDKEVEIS AIGAEIKAAM
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)