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AT4G14830.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.644
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2T2eggNOG:ENOG41128RQEMBL:AL161540EMBL:BT012599EMBL:BT014827EMBL:CP002687EMBL:Z97337
EnsemblPlants:AT4G14830EnsemblPlants:AT4G14830.1entrez:827140GeneID:827140Gramene:AT4G14830.1hmmpanther:PTHR33879hmmpanther:PTHR33879:SF3
HOGENOM:HOG000239751KEGG:ath:AT4G14830OMA:LIHHARDPIR:D71411Proteomes:UP000006548RefSeq:NP_193219.1STRING:3702.AT4G14830.1
TAIR:AT4G14830tair10-symbols:HSP1UniGene:At.33234UniGene:At.33235UniProt:O23338
Coordinates (TAIR10) chr4:+:8510983..8511441
Molecular Weight (calculated) 16936.30 Da
IEP (calculated) 5.59
GRAVY (calculated) -0.36
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MKIHPLPRNE NNNNLIHHAR DPTREPGKKL RRLPHIFSRV LELPLKSDAD VAVEESHDCF RFVAETDGGG GGGVRAYMVE IHPGVTKILV RTNGSSSLGL
101: SLDELELDVW RFRLPESTRP ELVTVDCDGD GELIVTVPKI EDNGRDLIVL VQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)