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AT4G14530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97 (TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5068eggNOG:KOG0014EMBL:AL161539EMBL:CP002687EMBL:Z97336EnsemblPlants:AT4G14530EnsemblPlants:AT4G14530.1
entrez:827100GeneID:827100Gramene:AT4G14530.1KEGG:ath:AT4G14530ncoils:CoilPhylomeDB:O23309PIR:F71407
Proteomes:UP000006548RefSeq:NP_193189.1STRING:3702.AT4G14530.1TAIR:AT4G14530UniGene:At.65378UniProt:O23309
Coordinates (TAIR10) chr4:-:8343476..8343883
Molecular Weight (calculated) 15618.00 Da
IEP (calculated) 3.84
GRAVY (calculated) -0.71
Length 135 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEDESLAKS EDSEELRKAI ESMSTMLRDL KELESVNNYR RDHQEDVKIN NDIKIKNLVS HETLNLQLSS ATFGVPDDDR LKEETEMVVF DDQILAIFES
101: NDKPTGNLED QEIDLDQFLD FDQLIDFEGL IDGDY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)