AT4G14390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.913 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ankyrin repeat family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT4G14400.1); Has 23458 Blast hits to 11336 proteins in 519 species: Archae - 46; Bacteria - 1569; Metazoa - 13305; Fungi - 1747; Plants - 2323; Viruses - 62; Other Eukaryotes - 4406 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8289644..8292083 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76714.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.21 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.18 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 694 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDELFVSISS TFSKTSCITD LLLPLELDRI EAQRSTDASH DQQNRTYLPM NIHGSQDFSQ SGGDGVTPLT GDTESVPEFL TNLRLSDLYA IRGEDVRMIP 101: EVFSKISDGN KECLEKLRSR GISVARIKSN TGDSILHLAV TWGHLELVKE IVCECPRLLL EQNSSGQTPL HVAAHSGHTT IVEAFVALVT FSSARLCNEE 201: SERMNPYVLK DKDGNTALYY AIEGRYFEMA VCLVNANQDA PFLGNKYGVS SLFVAINTGD VSLVKAILKI IGNKDLKGKK SNLESKLQGQ KSLAHVALVT 301: QSIAGVLDVI LDEYPSLMDE RDINGWTCLS LAAHIGYYEG VCNLLERSTK GVYVCDQDGS FPIHTAAEKG HENIVEEFIK RCPGSKHLLN KLGQNVLHIA 401: AKNGKFWISN MLIINKDTEH LGVGQDVDGN TPLHLAVMNW HFKSITWLAR SSKILKVRNK NGLRARDIAE REVKPHYIFQ ERWTLALLLY AIHSRGFESV 501: HSLTKPSVPL DPKNNRDYVN TLLLVAALVA TMTFAAGFTI PGGFNSSAPH LGRATLATNP TLFIFLVLDI LAMQSSVATI GILIWAQLGD PVLIRSSLHV 601: ALPLLLFALL CMPLAFLFGV VTAVGHVKWL VVIICIISVL FFSWAIFVLG PHVMLQRSYV SPKYAGDFLV TFMQYKDIIG LFVSLIKFLF CGCY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)