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AT4G14060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Polyketide cyclase/dehydrase and lipid transport superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 328 (TAIR:AT2G01520.1); Has 365 Blast hits to 337 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JF95eggNOG:ENOG41113R7EMBL:AL161538EMBL:AY057523EMBL:AY090316EMBL:CP002687EMBL:Z97335
EnsemblPlants:AT4G14060EnsemblPlants:AT4G14060.1entrez:827042Gene3D:3.30.530.20GeneID:827042GO:GO:0006952GO:GO:0009607
Gramene:AT4G14060.1hmmpanther:PTHR31338hmmpanther:PTHR31338:SF15HOGENOM:HOG000239987IntAct:O23267InterPro:IPR000916InterPro:IPR023393
KEGG:ath:AT4G14060OMA:CKITMTWPfam:PF00407PhylomeDB:O23267PIR:G71401Proteomes:UP000006548RefSeq:NP_193142.1
SMART:SM01037SMR:O23267STRING:3702.AT4G14060.1SUPFAM:SSF55961TAIR:AT4G14060UniGene:At.22969UniProt:O23267
Coordinates (TAIR10) chr4:+:8107405..8108158
Molecular Weight (calculated) 17316.60 Da
IEP (calculated) 5.82
GRAVY (calculated) -0.58
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSGTYVTE VPLKGSAEKH YKRWRNENHL FPDAIGHHIQ GVTVHDGEWD SHGALKIWNY TLDGKPEMFK ERREIDDENM AVTFVGLEGH VMEQLKVYDT
101: ILQFIQKSPD DIVCKITMTW EKRADDSPEP SNYMKLVKSL AADMDAHVLK A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)