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AT4G14000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Putative methyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43320.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111NE8eggNOG:KOG2920EMBL:AY072417EMBL:AY114714
EMBL:CP002687EnsemblPlants:AT4G14000EnsemblPlants:AT4G14000.1entrez:827036
Gene3D:3.40.50.150GeneID:827036GO:GO:0008168Gramene:AT4G14000.1
hmmpanther:PTHR14614hmmpanther:PTHR14614:SF39InterPro:IPR019410InterPro:IPR029063
KEGG:ath:AT4G14000OMA:CGHALPGPfam:PF10294PhylomeDB:Q8VY62
Proteomes:UP000006548RefSeq:NP_567417.1SMR:Q8VY62STRING:3702.AT4G14000.1
SUPFAM:SSF53335TAIR:AT4G14000UniGene:At.33315UniProt:Q8VY62
Coordinates (TAIR10) chr4:+:8090851..8092347
Molecular Weight (calculated) 31302.20 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.08
Length 290 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKPTFQLF SSSQGSGLGL GFLDSSEPAL PPPPPPVEVL SFEVSSSTDF EVDKLTIGEI TLLKGRVSTK EVFGLPNSDL VPGVYEGGLK LWEGSIDLVK
101: ALEKESQTGN LSFSGKRVLE LGCGHALPGI YACLKGSDAV HFQDFNAEVL RCLTIPNLNA NLSEKSSSVS VSETEVRFFA GEWSEVHQVL PLVNSDGETN
201: KKGGYDIILM AETIYSISAQ KSQYELIKRC LAYPDGAVYM AAKKYYFGVG GGTRQFLSMI EKDGALASTL VSQVTDGSSN VREVWKLSYK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)