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AT4G13790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G38850.1); Has 1202 Blast hits to 1187 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1201; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVJUeggNOG:ENOG41105U8EMBL:AL035528EMBL:AL161537
EMBL:AY088655EMBL:BT024644EMBL:CP002687EnsemblPlants:AT4G13790
EnsemblPlants:AT4G13790.1entrez:827013GeneID:827013GO:GO:0009733
GO:GO:0010114GO:GO:0010218Gramene:AT4G13790.1hmmpanther:PTHR31929
hmmpanther:PTHR31929:SF11HOGENOM:HOG000238628InterPro:IPR003676KEGG:ath:AT4G13790
KO:K14488OMA:VCYLNKPPfam:PF02519PhylomeDB:Q9SVN4
PIR:T05248Proteomes:UP000006548RefSeq:NP_193115.1STRING:3702.AT4G13790.1
TAIR:AT4G13790UniGene:At.64183UniProt:Q9SVN4
Coordinates (TAIR10) chr4:-:7999846..8000124
Molecular Weight (calculated) 10576.80 Da
IEP (calculated) 10.19
GRAVY (calculated) -0.08
Length 92 amino acids
Sequence (TAIR10)
(BLAST)
1: MAFLRSFFAT KHIIRRSFTT ESLSTPKGFF AVYVGENLKK KRYLVPVCYL NKPSFQALLR KAEEEFGFNH PTGGLSLPCD EAFFFTVTSQ IR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)