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AT4G13550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21531424 (2011): plastid
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : triglyceride lipases;triglyceride lipases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQ32eggNOG:ENOG410ZPWGEMBL:CP002687EnsemblPlants:AT4G13550
EnsemblPlants:AT4G13550.1entrez:826988Gene3D:2.60.40.150Gene3D:3.40.50.1820
GeneID:826988GO:GO:0006629GO:GO:0009507GO:GO:0016787
Gramene:AT4G13550.1hmmpanther:PTHR21493hmmpanther:PTHR21493:SF119InParanoid:F4JT30
InterPro:IPR000008InterPro:IPR002921InterPro:IPR029058iPTMnet:F4JT30
KEGG:ath:AT4G13550OMA:EREKQWWPaxDb:F4JT30Pfam:PF00168
Pfam:PF01764PRIDE:F4JT30ProteinModelPortal:F4JT30Proteomes:UP000006548
RefSeq:NP_193091.5SMR:F4JT30SUPFAM:SSF49562SUPFAM:SSF53474
TAIR:AT4G13550UniGene:At.33362UniProt:F4JT30
Coordinates (TAIR10) chr4:-:7871251..7876160
Molecular Weight (calculated) 79384.60 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.43
Length 715 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRLLKAKPN GEWCHCHIGR TKEPKWNEDF VFNIKLPPAK KIEIAAWDAN LVTPHKRMGN SEINLESVCD GNLHKVLVEL DGIGGGGKVQ LEIKYKGFGE
101: VEEEKKWWRF PFVSEFLQRN EIKSVLKNFV DSEAVESVLK NLVDSEAVPA RQFVEYAFGQ LKSLNDAPLK NTELLNNTAE DSEGASSEDS SDQHRSTNLS
201: SSGKLSKDKD GDGDGHGNEL EDDNESGSIQ SESNFWDNIP DIVGQNIVQK LGLPSPEKLK WNGTELLENF GLQSRKTAEA GYIESGLATA DTREADDEKE
301: DGQVAINASK SSLADMKNAT QELLKQADNV FGALMVLKAV VPHLSKDSVG SEKVIEKNGS SSVTDDVSGS SKTEKISGLV NVDGADEKNA EEMKTLFSSA
401: ESAMEAWAML ATALGHPSFI KSEFEKLCFL ENDITDTQVA IWRDARRKRV VIAFRGTEQT KWKDLQTDLM LVPAGLNPER IGGDFKQEVQ VHSGFLSAYD
501: SVRIRIISLL KMTIGYIDDV TEREDKWHVY VTGHSLGGAL ATLLALELSS SQLAKRGAIT VTMYNFGSPR VGNKQFAEIY NQKVKDSWRV VNHRDIIPTV
601: PRLMGYCHVA HPVYLSAGDV EDIEFQKDGY HAEVIGEATP DILVSRFMKG EKELVEKILQ TEIKIFNALR DGSALMQHME DFYYITLLES VKLYYKTVED
701: PKGVESTTIQ SVGES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)