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AT4G13540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZEDeggNOG:ENOG410YTP7EMBL:AL049656EMBL:AL161536
EMBL:AY133693EMBL:CP002687EnsemblPlants:AT4G13540EnsemblPlants:AT4G13540.1
entrez:826986GeneID:826986Gramene:AT4G13540.1hmmpanther:PTHR37226
hmmpanther:PTHR37226:SF1HOGENOM:HOG000090863IntAct:Q9T0H4KEGG:ath:AT4G13540
ncoils:CoilOMA:MAETEWRPhylomeDB:Q9T0H4PIR:T06656
Proteomes:UP000006548RefSeq:NP_193090.1STRING:3702.AT4G13540.1TAIR:AT4G13540
UniGene:At.33364UniProt:Q9T0H4
Coordinates (TAIR10) chr4:+:7869896..7870604
Molecular Weight (calculated) 24967.10 Da
IEP (calculated) 10.58
GRAVY (calculated) -1.18
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGSTSKDER NSSKRRIKVK ANEQRRRETR RELDEKERVI LALKMAETEW RKERKRLREE VKRLRQKMEE KEEGKAKQHE WEWVVEQMCL ERAVREEAVE
101: RWKQLYFAIK NELDDLIHTT YGEALRQKPQ EEVAKAVQEL RKEVKARGET IETLKGRINL MEKQQNGKER EIDLLRQSLR ILGGSSGKNK ALSSTTRNLT
201: VFKTKFIGCK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)